RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ZBTB44Q8NCP5 570 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 UCMAQ8WVF2 138 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 BTN2A3PQ96KV6 586 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 MCEEQ96PE7 176 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 NPY6RQ99463 290 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 IER2Q9BTL4 223 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 SMOC1Q9H4F8 434 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ASNSD1Q9NWL6 643 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 ELOVL2Q9NXB9 296 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 METRNQ9UJH8 293 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 TMEM59LQ9UK28 342 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 RAB23Q9ULC3 237 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 PCDHGA2Q9Y5H1 932 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 STON1Q9Y6Q2 735 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 MYO15AQ9UKN7 3530 aa9.33□□□□□ -0.92
GTF3C1-210ENST00000569394 A0A0A0MRY4 1105 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 I6L893 689 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 ZBTB24O43167 697 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 BNIP3LO60238 219 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 SYNCRIPO60506 623 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CNTN5O94779 1100 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 ALDH1A2O94788 518 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CALB1P05937 261 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 GABRG2P18507 467 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 GPD1P21695 349 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 BCKDHBP21953 392 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 MZF1P28698 734 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CSKP41240 450 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 RPL7AP62424 266 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 SPEM2Q0P670 501 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 PTP4A2Q12974 167 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 SLC25A52Q3SY17 297 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 FUT11Q495W5 492 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 DCUN1D2Q6PH85 259 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 WDR59Q6PJI9 974 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 MON1BQ7L1V2 547 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 FAM124AQ86V42 546 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 WDR5BQ86VZ2 330 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 MCOLN2Q8IZK6 566 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CCAR2Q8N163 923 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 SUMF1Q8NBK3 374 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 ZNF397Q8NF99 534 aaPredicted RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CCDC26Q8TAB7 109 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 FAM172AQ8WUF8 416 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 RPL10LQ96L21 214 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 TTYH3Q9C0H2 523 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 MPP6Q9NZW5 540 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 STOML2Q9UJZ1 356 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 FBXO10Q9UK96 956 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 USP18Q9UMW8 372 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 CYP8B1Q9UNU6 501 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 LUC7L2Q9Y383 392 aaKnown RBP9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 DAAM1Q9Y4D1 1078 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 FANCMQ8IYD8 2048 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 SDK1Q7Z5N4 2213 aa9.32□□□□□ -0.92
GTF3C1-210ENST00000569394 PTPRZ1P23471 2315 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 A0A1W2PQF6 199 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 DDX3XO00571 662 aaKnown RBP eCLIP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 AP5Z1O43299 807 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CCP110O43303 1012 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CBFA2T2O43439 604 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 LILRB5O75023 590 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CAVIN2O95810 425 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 LATS1O95835 1130 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 FTLP02792 175 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 GYPCP04921 128 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 TPM3P06753 285 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 SLC2A3P11169 496 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 NDUFV2P19404 249 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 RDXP35241 583 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 PBX1P40424 430 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 DHPSP49366 369 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CXCR3P49682 368 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 STK19P49842 368 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 ADKP55263 362 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 NNTQ13423 1086 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 STARD3Q14849 445 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 ACCSLQ4AC99 568 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 USP39Q53GS9 565 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 ALFQ53S48 1182 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 PITRM1Q5JRX3 1037 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 RABGAP1LQ5R372 815 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 DAB2IPQ5VWQ8 1189 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 RWDD4Q6NW29 188 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 MAMSTRQ6ZN01 415 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 BEND5Q7L4P6 421 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 TRMT11Q7Z4G4 463 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 ADIPOR2Q86V24 386 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 PHF13Q86YI8 300 aaPredicted RBP9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 TMEFF1Q8IYR6 380 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 AHI1Q8N157 1196 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CAMKK1Q8N5S9 505 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 CCDC185Q8N715 623 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 OR52K2Q8NGK3 314 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 GAB3Q8WWW8 586 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 NELL1Q92832 810 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 AZIN2Q96A70 460 aa9.31□□□□□ -0.92
GTF3C1-210ENST00000569394 ZNF653Q96CK0 615 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms