RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MS4A13Q5J8X5 152 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 DBX2Q6ZNG2 339 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 USP30Q70CQ3 517 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 ADAT2Q7Z6V5 191 aaKnown RBP14.16□□□□□ -0.14
CNOT1-215ENST00000569020 GANCQ8TET4 914 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 CDC6Q99741 560 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 TM9SF3Q9HD45 589 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 KIAA1522Q9P206 1035 aaPredicted RBP14.16□□□□□ -0.14
CNOT1-215ENST00000569020 CTNND2Q9UQB3 1225 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.16□□□□□ -0.14
CNOT1-215ENST00000569020 SNX11Q9Y5W9 270 aa14.16□□□□□ -0.14
CNOT1-215ENST00000569020 FRYQ5TBA9 3013 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 PPP1R3GB7ZBB8 358 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 LUC7L3O95232 432 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 MOCS2O96007 188 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 APOEP02649 317 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 AFPP02771 609 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 FYNP06241 537 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 SRPRAP08240 638 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 KRT5P13647 590 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 CSKP41240 450 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 RPL34P49207 117 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 MARSP56192 900 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 RPS24P62847 133 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 HNRNPA1L2Q32P51 320 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 BEND5Q7L4P6 421 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 SLCO6A1Q86UG4 719 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 DHX40Q8IX18 779 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 KDM1BQ8NB78 822 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 BAHD1Q8TBE0 780 aaPredicted RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 ADAM32Q8TC27 787 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 MYO19Q96H55 970 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 SLC39A13Q96H72 371 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 LMLNQ96KR4 655 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 NUCKS1Q9H1E3 243 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 MTG2Q9H4K7 406 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 FBXL12Q9NXK8 326 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 TJP2Q9UDY2 1190 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 INTS6Q9UL03 887 aaKnown RBP14.15□□□□□ -0.14
CNOT1-215ENST00000569020 CNTN6Q9UQ52 1028 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 ERVW-1Q9UQF0 538 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 ANKRD6Q9Y2G4 727 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 CEP83Q9Y592 693 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 SLCO1B1Q9Y6L6 691 aa14.15□□□□□ -0.14
CNOT1-215ENST00000569020 TARSL2A2RTX5 802 aaKnown RBP14.14□□□□□ -0.15
CNOT1-215ENST00000569020 FAM47DPA6NHR8 397 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 SIN3BO75182 1162 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 BMP6P22004 513 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 STX17P56962 302 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 SCAPQ12770 1279 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 PAK1Q13153 545 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 CST6Q15828 149 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 MEA1Q16626 185 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 DCAF6Q58WW2 860 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 FSCBQ5H9T9 825 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 PITRM1Q5JRX3 1037 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 SYPL2Q5VXT5 272 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 CCNI2Q6ZMN8 369 aaPredicted RBP14.14□□□□□ -0.15
CNOT1-215ENST00000569020 TAC4Q86UU9 113 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 PROSER1Q86XN7 944 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 LGI2Q8N0V4 545 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 CFAP52Q8N1V2 620 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 STK32AQ8WU08 396 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 IGSF8Q969P0 613 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 MYEOVQ96EZ4 313 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 BTN2A3PQ96KV6 586 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 MRGPRX3Q96LB0 322 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 KREMEN1Q96MU8 473 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 MED15Q96RN5 788 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 OMDQ99983 421 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 SRRTQ9BXP5 876 aaKnown RBP14.14□□□□□ -0.15
CNOT1-215ENST00000569020 INTS2Q9H0H0 1204 aaKnown RBP14.14□□□□□ -0.15
CNOT1-215ENST00000569020 POPDC2Q9HBU9 364 aa14.14□□□□□ -0.15
CNOT1-215ENST00000569020 UBE2TQ9NPD8 197 aaPredicted RBP14.14□□□□□ -0.15
CNOT1-215ENST00000569020 A0A1W2PP55 124 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 LRRC72A6NJI9 287 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 BIN1O00499 593 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 THAP12O43422 761 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 DFNA5O60443 496 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-215ENST00000569020 FGFR1OPO95684 399 aaKnown RBP14.13□□□□□ -0.15
CNOT1-215ENST00000569020 NNMTP40261 264 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 CCT8P50990 548 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 C21orf59P57076 290 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 YWHAZP63104 245 aaKnown RBP14.13□□□□□ -0.15
CNOT1-215ENST00000569020 RACK1P63244 317 aaKnown RBP14.13□□□□□ -0.15
CNOT1-215ENST00000569020 MORC3Q14149 939 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 ARID5BQ14865 1188 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 RNF219Q5W0B1 726 aaPredicted RBP14.13□□□□□ -0.15
CNOT1-215ENST00000569020 RAP1GAP2Q684P5 730 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 DENND1BQ6P3S1 775 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 MMS22LQ6ZRQ5 1243 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 ENOSF1Q7L5Y1 443 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 CHSY1Q86X52 802 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 ATP6V0D2Q8N8Y2 350 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 ZNF606Q8WXB4 792 aa14.13□□□□□ -0.15
CNOT1-215ENST00000569020 SKA1Q96BD8 255 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms