RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	C2orf71	A6NGG8	1288 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	HCRT	O43612	131 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	TM7SF2	O76062	418 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	ALDOA	P04075	364 aa	Known RBP	13	□□□□□ -0.33
PKM-222	ENST00000568883	DNAJB2	P25686	324 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	SERPINB6	P35237	376 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	ALDH18A1	P54886	795 aa	Known RBP	13	□□□□□ -0.33
PKM-222	ENST00000568883	LILRA4	P59901	499 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	PDE1C	Q14123	709 aa	Predicted RBP	13	□□□□□ -0.33
PKM-222	ENST00000568883	MFSD10	Q14728	455 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	CCL15	Q16663	113 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	ACSBG2	Q5FVE4	666 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	SNX30	Q5VWJ9	437 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	TRIM68	Q6AZZ1	485 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	ZNF567	Q8N184	647 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	ARNTL2	Q8WYA1	636 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	PRR11	Q96HE9	360 aa	Predicted RBP	13	□□□□□ -0.33
PKM-222	ENST00000568883	FAM161B	Q96MY7	647 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	VAT1	Q99536	393 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	CDHR5	Q9HBB8	845 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	SYBU	Q9NX95	663 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	KLK14	Q9P0G3	267 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	DNAJB4	Q9UDY4	337 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	MARCO	Q9UEW3	520 aa	Predicted RBP	13	□□□□□ -0.33
PKM-222	ENST00000568883	DNAJC16	Q9Y2G8	782 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883	RPS6KL1	Q9Y6S9	549 aa		13	□□□□□ -0.33
PKM-222	ENST00000568883		C9IYK1	514 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	BTBD19	C9JJ37	291 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	DCLK1	O15075	740 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	DYNC1LI2	O43237	492 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	MAP3K7	O43318	606 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	AP2A1	O95782	977 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	F9	P00740	461 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	MPO	P05164	745 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	GNAT1	P11488	350 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TKT	P29401	623 aa	Known RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	HADHA	P40939	763 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	CRYBB1	P53674	252 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	GJA9	P57773	515 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TPI1	P60174	286 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	NME3	Q13232	169 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	BSPRY	Q5W0U4	402 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	LRRC74B	Q6ZQY2	392 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TMEM86A	Q8N2M4	240 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	CCDC33	Q8N5R6	958 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	2e-6	■■■■■ 29.4
PKM-222	ENST00000568883	MICAL1	Q8TDZ2	1067 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	ISL2	Q96A47	359 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	ZNF333	Q96JL9	665 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TRIM56	Q9BRZ2	755 aa	Known RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	KATNAL1	Q9BW62	490 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	CNGB3	Q9NQW8	809 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	NSMCE4A	Q9NXX6	385 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	SOX13	Q9UN79	622 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	LRCH1	Q9Y2L9	728 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	MFHAS1	Q9Y4C4	1052 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	PSMD3	O43242	534 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TIMM44	O43615	452 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.99	□□□□□ -0.33	3e-9	■□□□□ 8.6
PKM-222	ENST00000568883	KRT36	O76013	467 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	USP1	O94782	785 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	PROC	P04070	461 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	FGF3	P11487	239 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	ADRA1B	P35368	520 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	LHX1	P48742	406 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TKTL1	P51854	596 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	RPL10A	P62906	217 aa	Known RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	AP2B1	P63010	937 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	KDSR	Q06136	332 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	KLC1	Q07866	573 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	THOC5	Q13769	683 aa	Known RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	FAM110C	Q1W6H9	321 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TEDDM1	Q5T9Z0	273 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	TREML1	Q86YW5	311 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	RBM15B	Q8NDT2	890 aa	Known RBP	12.99	□□□□□ -0.33
PKM-222	ENST00000568883	DNAJB3	Q8WWF6	145 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	OSBPL1A	Q9BXW6	950 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	GPAM	Q9HCL2	828 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	NMRK1	Q9NWW6	199 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	COPG2	Q9UBF2	871 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	VANGL2	Q9ULK5	521 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	SUFU	Q9UMX1	484 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	IPP	Q9Y573	584 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	CDY2A	Q9Y6F7	541 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	CDY1	Q9Y6F8	540 aa		12.99	□□□□□ -0.33
PKM-222	ENST00000568883	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	GABRD	O14764	452 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	APOA4	P06727	396 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	RALB	P11234	206 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	ALOX15	P16050	662 aa	Predicted RBP	12.98	□□□□□ -0.33
PKM-222	ENST00000568883	NPY2R	P49146	381 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	PSEN2	P49810	448 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	CPT1A	P50416	773 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	CSE1L	P55060	971 aa	Known RBP	12.98	□□□□□ -0.33
PKM-222	ENST00000568883	SESN3	P58005	492 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	IRX4	P78413	519 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	CRADD	P78560	199 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	PPID	Q08752	370 aa	Known RBP	12.98	□□□□□ -0.33
PKM-222	ENST00000568883	PRPSAP1	Q14558	356 aa		12.98	□□□□□ -0.33
PKM-222	ENST00000568883	PCLAF	Q15004	111 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms