RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 U2AF2P26368 475 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDH13-211ENST00000568770 PSMA5P28066 241 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 MARCKSP29966 332 aaPredicted RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 ARL4AP40617 200 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 DGKEP52429 567 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 RUNX3Q13761 415 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ZNF460Q14592 562 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 PPP2R5AQ15172 486 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ZNF568Q3ZCX4 644 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ARHGAP15Q53QZ3 475 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 BMP2KLQ5H9B9 411 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 PMS2CLQ68D20 193 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 NAIF1Q69YI7 327 aaPredicted RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 CENPPQ6IPU0 288 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 CPLX2Q6PUV4 134 aaKnown RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ZNF662Q6ZS27 426 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 RUFY3Q7L099 469 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 MTDHQ86UE4 582 aaKnown RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 SKAP1Q86WV1 359 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 TTC9BQ8N6N2 239 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ZNF274Q96GC6 653 aaPredicted RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 IFT74Q96LB3 600 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 MAGEB10Q96LZ2 347 aaPredicted RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 ACO2Q99798 780 aaKnown RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 POLR3CQ9BUI4 534 aaPredicted RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 SLC46A2Q9BY10 475 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 SLC6A17Q9H1V8 727 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 CDT1Q9H211 546 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 SLC32A1Q9H598 525 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 TASP1Q9H6P5 420 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 PTPRHQ9HD43 1115 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 TUBGCP4Q9UGJ1 667 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 TPCN1Q9ULQ1 816 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 CCL26Q9Y258 94 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 ASB3Q9Y575 518 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 TNPO3Q9Y5L0 923 aaKnown RBP6.08□□□□□ -1.44
CDH13-211ENST00000568770 ATMQ13315 3056 aa6.08□□□□□ -1.44
CDH13-211ENST00000568770 MYH10P35580 1976 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 APC2O95996 2303 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 MYOCOSA0A1B0GUC4 107 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 MTMR11A4FU01 709 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ARHGEF35A5YM69 484 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 OR14I1A6ND48 311 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 M0QZQ0 153 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 LARGE1O95461 756 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 MPOP05164 745 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 CKMP06732 381 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ARSAP15289 507 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 DRD1P21728 446 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 BCKDHBP21953 392 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 GRK2P25098 689 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 GJA4P35212 333 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 GRK3P35626 688 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 KRT2P35908 639 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 DHPSP49366 369 aaPredicted RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 CDR1P51861 262 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 IRX6P78412 446 aaPredicted RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 SIM1P81133 766 aaPredicted RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 SPAG1Q07617 926 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 LMAN2Q12907 356 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 PAK1Q13153 545 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 GPR17Q13304 367 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 DMC1Q14565 340 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 MLANAQ16655 118 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 USP39Q53GS9 565 aaKnown RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 PAQR3Q6TCH7 311 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ZNF605Q86T29 641 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 USP37Q86T82 979 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ITIH5Q86UX2 942 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 PROSER1Q86XN7 944 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 CMTM8Q8IZV2 173 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ATAD1Q8NBU5 361 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 PIGKQ92643 395 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 NINJ1Q92982 152 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 ACAP3Q96P50 834 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 GCNAQ96QF7 691 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 MTMR9Q96QG7 549 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 P2RY13Q9BPV8 354 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 TCHPQ9BT92 498 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 TPSD1Q9BZJ3 242 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 ZNF552Q9H707 407 aaPredicted RBP6.07□□□□□ -1.44
CDH13-211ENST00000568770 TUFT1Q9NNX1 390 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 TBX20Q9UMR3 447 aa6.07□□□□□ -1.44
CDH13-211ENST00000568770 NAV2Q8IVL1 2488 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 PHLPP2Q6ZVD8 1323 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 STK36Q9NRP7 1315 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 OR6C75A6NL08 312 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 CCDC169A6NNP5 214 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 ABLIM1O14639 778 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 CDKL5O76039 1030 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 CYBBP04839 570 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 MCF2P10911 925 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 PYGMP11217 842 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 HARSP12081 509 aaKnown RBP6.06□□□□□ -1.44
CDH13-211ENST00000568770 ENGP17813 658 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 ATF6P18850 670 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 PROZP22891 400 aa6.06□□□□□ -1.44
CDH13-211ENST00000568770 CDC25CP30307 473 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms