RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	CDH4	P55283	916 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	OXCT1	P55809	520 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	RWDD2B	P57060	319 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	CA9	Q16790	459 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	ANO4	Q32M45	955 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	PREPL	Q4J6C6	727 aa	Predicted RBP	12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	FYB2	Q5VWT5	728 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	RNF43	Q68DV7	783 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	TXNRD3NB	Q6F5E7	133 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	RFWD3	Q6PCD5	774 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	RHBDF2	Q6PJF5	856 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	TPGS1	Q6ZTW0	290 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	RNF135	Q8IUD6	432 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	ZNF683	Q8IZ20	524 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	KCTD6	Q8NC69	237 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	EXD1	Q8NHP7	514 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	HES6	Q96HZ4	224 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	XPO6	Q96QU8	1125 aa	Known RBP	12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	KCTD15	Q96SI1	283 aa	Predicted RBP	12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	SLC2A11	Q9BYW1	496 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	PRDM16	Q9HAZ2	1276 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	PCDH18	Q9HCL0	1135 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	JRKL	Q9Y4A0	524 aa		12.38	□□□□□ -0.43
FANCA-231	ENST00000568626	KIAA1549L	Q6ZVL6	1849 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	NEDD8-MDP1	E9PL57	170 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	CREB3	O43889	395 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	CACNG3	O60359	315 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TSPAN3	O60637	253 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TBL1X	O60907	577 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	SRGAP2	O75044	1071 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	LUC7L3	O95232	432 aa	Known RBP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TNNT1	P13805	278 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TYR	P14679	529 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	HOXD9	P28356	352 aa	Predicted RBP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	EPHB2	P29323	1055 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	MAPKAPK2	P49137	400 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	ARSE	P51690	589 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	COPS2	P61201	443 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TNK2	Q07912	1038 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	CDH18	Q13634	790 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	DPYSL3	Q14195	570 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	RPS6KA1	Q15418	735 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	ZNF569	Q5MCW4	686 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	MEI1	Q5TIA1	1274 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	RWDD4	Q6NW29	188 aa	Known RBP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	RFX8	Q6ZV50	586 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	C14orf80	Q86SX3	495 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	RALGPS2	Q86X27	583 aa	Predicted RBP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TMEM25	Q86YD3	366 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	SUGP1	Q8IWZ8	645 aa	Known RBP	12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	RCOR2	Q8IZ40	523 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	PYROXD2	Q8N2H3	581 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	TSC1	Q92574	1164 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	KRT35	Q92764	455 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	IGSF8	Q969P0	613 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	CALN1	Q9BXU9	219 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	EPHX3	Q9H6B9	360 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	GTSE1	Q9NYZ3	720 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	NEU3	Q9UQ49	428 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	SNX10	Q9Y5X0	201 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	DOCK4	Q8N1I0	1966 aa		12.37	□□□□□ -0.43
FANCA-231	ENST00000568626	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	WASH4P	A8MWX3	477 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	FAM72C	H0Y354	149 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	TRDMT1	O14717	391 aa	Known RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	DAPK3	O43293	454 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	GOT1	P17174	413 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	KDELR1	P24390	212 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	GJA4	P35212	333 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	PTPN7	P35236	360 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	SERPINB6	P35237	376 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	MARCKSL1	P49006	195 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	PEX5	P50542	639 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	SGSH	P51688	502 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	GNG11	P61952	73 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	RPS24	P62847	133 aa	Known RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	ZNF177	Q13360	481 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	DPYS	Q14117	519 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	PPP2R5E	Q16537	467 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	C6orf118	Q5T5N4	469 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	FAM72A	Q5TYM5	149 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	FAM72D	Q6L9T8	149 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	ZNF783	Q6ZMS7	281 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	SETD3	Q86TU7	594 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	ZSCAN30	Q86W11	494 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	FAM72B	Q86X60	149 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	MFN1	Q8IWA4	741 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	SLC35F6	Q8N357	371 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	RTL3	Q8N8U3	475 aa	Known RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	RAPGEF5	Q92565	580 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	FAF2	Q96CS3	445 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	CSPG4P5	Q96PW8	444 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	CARD9	Q9H257	536 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	ARHGEF4	Q9NR80	690 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	KLHL11	Q9NVR0	708 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	TMEM248	Q9NWD8	314 aa		12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	CWC15	Q9P013	229 aa	Known RBP	12.36	□□□□□ -0.43
FANCA-231	ENST00000568626	PIAS3	Q9Y6X2	628 aa		12.36	□□□□□ -0.43

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