RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 GBP5Q96PP8 586 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 ELP3Q9H9T3 547 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 SNX15Q9NRS6 342 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 RPS6KL1Q9Y6S9 549 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 ETS2P15036 469 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 PTPN9P43378 593 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 ABCE1P61221 599 aaKnown RBP18.8■□□□□ 0.6
PKD1-235ENST00000568591 ROR2Q01974 943 aaKnown RBP18.8■□□□□ 0.6
PKD1-235ENST00000568591 CUL3Q13618 768 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 GSTA3Q16772 222 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 LRRC8BQ6P9F7 803 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 PGM2L1Q6PCE3 622 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 PDSS2Q86YH6 399 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 OR52K1Q8NGK4 314 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 NR1H4Q96RI1 486 aaPredicted RBP18.8■□□□□ 0.6
PKD1-235ENST00000568591 EIF2AQ9BY44 585 aaKnown RBP18.8■□□□□ 0.6
PKD1-235ENST00000568591 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 MORF4L1Q9UBU8 362 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 POMPQ9Y244 141 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 SH3BP1Q9Y3L3 701 aa18.8■□□□□ 0.6
PKD1-235ENST00000568591 CREB3O43889 395 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 CCNT2O60583 730 aaKnown RBP18.79■□□□□ 0.6
PKD1-235ENST00000568591 GRIA2P42262 883 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 NR2C2P49116 596 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 ZNF567Q8N184 647 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 DCLK2Q8N568 766 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 LINC01465Q8N7H1 131 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 CDKL2Q92772 493 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 COG4Q9H9E3 785 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 G3BP2Q9UN86 482 aaKnown RBP18.79■□□□□ 0.6
PKD1-235ENST00000568591 CITO14578 2027 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 GOLGA8QA0A0J9YX86 632 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 GOLGA8OA6NCC3 632 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 GOLGA8NF8WBI6 632 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 GOLGA8TH3BQL2 631 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 KIF3CO14782 793 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 PGAM1P18669 254 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 CNTFP26441 200 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 KIZQ2M2Z5 673 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 SLC26A9Q7LBE3 791 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 DEFB106AQ8N104 65 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 PPP4R1Q8TF05 950 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 GDPD5Q8WTR4 605 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 MAF1Q9H063 256 aa18.79■□□□□ 0.6
PKD1-235ENST00000568591 CPSF2Q9P2I0 782 aaKnown RBP18.79■□□□□ 0.6
PKD1-235ENST00000568591 CCDC78A2IDD5 438 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 FKBP6O75344 327 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 KLHL2O95198 593 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 LTFP02788 710 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 AMHP03971 560 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 RAG1P15918 1043 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SERPINB6P35237 376 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 MSX2P35548 267 aaPredicted RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 RAB27AP51159 221 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 ARHGAP1Q07960 439 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 NME8Q8N427 588 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 ADAM32Q8TC27 787 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 RNF217Q8TC41 542 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SLC2A14Q8TDB8 520 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 ATP2A3Q93084 1043 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 FAM149B1Q96BN6 582 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 TRAPPC9Q96Q05 1148 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 OR52B2Q96RD2 323 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 PRDM12Q9H4Q4 367 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 PDP2Q9P2J9 529 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 DCDC2Q9UHG0 476 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 CPA3P15088 417 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 TKTP29401 623 aaKnown RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 SLC26A2P50443 739 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SARNPP82979 210 aaKnown RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 TBL3Q12788 808 aaKnown RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 ITGA7Q13683 1181 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 PPM1LQ5SGD2 360 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SPNS2Q8IVW8 549 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 ACMSDQ8TDX5 336 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 CERS2Q96G23 380 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 APOL2Q9BQE5 337 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 GORASP1Q9BQQ3 440 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 GCOM2Q9BZD3 368 aaPredicted RBP18.78■□□□□ 0.6
PKD1-235ENST00000568591 TRIM4Q9C037 500 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SORCS3Q9UPU3 1222 aa18.78■□□□□ 0.6
PKD1-235ENST00000568591 SF3B1O75533 1304 aaKnown RBP eCLIP18.78■□□□□ 0.65e-10■■■■■ 120.6
PKD1-235ENST00000568591 DNAJC25-GNG10A0A024R161 153 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.77■□□□□ 0.6
PKD1-235ENST00000568591 SPTLC1O15269 473 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 SNUPNO95149 360 aaKnown RBP18.77■□□□□ 0.6
PKD1-235ENST00000568591 ZFXP17010 805 aaPredicted RBP18.77■□□□□ 0.6
PKD1-235ENST00000568591 KCTD2Q14681 263 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 TRIP10Q15642 601 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 C4orf22Q6V702 233 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 CYS1Q717R9 158 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 APLFQ8IW19 511 aaPredicted RBP18.77■□□□□ 0.6
PKD1-235ENST00000568591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.77■□□□□ 0.6
PKD1-235ENST00000568591 ACTRT2Q8TDY3 377 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 AFG1LQ8WV93 481 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 KBTBD7Q8WVZ9 684 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 PPP2R3CQ969Q6 453 aa18.77■□□□□ 0.6
PKD1-235ENST00000568591 WDR55Q9H6Y2 383 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms