RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 HCAR3P49019 387 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PSEN1P49768 467 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 GNGT1P63211 74 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 GUCY1A3Q02108 690 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 AUHQ13825 339 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 AGBL2Q5U5Z8 902 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PPP1R21Q6ZMI0 780 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 C14orf80Q86SX3 495 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CROCCP2Q86T23 111 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PDCD7Q8N8D1 485 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 USP33Q8TEY7 942 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 BADQ92934 168 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 TBC1D31Q96DN5 1066 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CFAP36Q96G28 342 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 SPATA17Q96L03 361 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 SERPINB12Q96P63 405 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 OSBPL2Q9H1P3 480 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CATSPERBQ9H7T0 1116 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PRDM16Q9HAZ2 1276 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 MRPL17Q9NRX2 175 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 AFF4Q9UHB7 1163 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 PCDHB12Q9Y5F1 795 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 MAD1L1Q9Y6D9 718 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 FOXO6A8MYZ6 492 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 SMAPO00193 183 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 NCAM2O15394 837 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 FGBP02675 491 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 SYN1P17600 705 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PSMB4P28070 264 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 GARSP41250 739 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 GRIA1P42261 906 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ZNF135P52742 658 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 DSG1Q02413 1049 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PLD1Q13393 1074 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 EIF4EBP2Q13542 120 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 PRKD1Q15139 912 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 RAP1GAP2Q684P5 730 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CASC4Q6P4E1 433 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 LRRC31Q6UY01 552 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 RELL1Q8IUW5 271 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CMTR2Q8IYT2 770 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 ZNF567Q8N184 647 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ARFGAP2Q8N6H7 521 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ATP11CQ8NB49 1132 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ROPN1BQ9BZX4 212 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 ROPN1Q9HAT0 212 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 IL23AQ9NPF7 189 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 OLA1Q9NTK5 396 aaKnown RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 NDFIP2Q9NV92 336 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CLIC5Q9NZA1 410 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 OPHN1O60890 802 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 NEBLO76041 1014 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PHBP35232 272 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PPP2R2AP63151 447 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 WASHC5Q12768 1159 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 SPARCL1Q14515 664 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 STAT4Q14765 748 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 TMED2Q15363 201 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PIK3R6Q5UE93 754 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 C4orf22Q6V702 233 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 FIBCD1Q8N539 461 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ATPAF2Q8N5M1 289 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ATP6V0D2Q8N8Y2 350 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 PGM2Q96G03 612 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 ZMYND15Q9H091 742 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 STMN4Q9H169 189 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 IL37Q9NZH6 218 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 CXXC1Q9P0U4 656 aaPredicted RBP7.26□□□□□ -1.25
SMG1-215ENST00000568239 GREB1Q4ZG55 1949 aa7.26□□□□□ -1.25
SMG1-215ENST00000568239 FAM92AA1XBS5 289 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 FGF18O76093 207 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 JCHAINP01591 159 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 ATP5C1P36542 298 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 KCNQ1P51787 676 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 MLLT6P55198 1093 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 SESN2P58004 480 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 GPX6P59796 221 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 SARNPP82979 210 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 TWF1Q12792 350 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 VEPH1Q14D04 833 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 MS4A13Q5J8X5 152 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 MSANTD2Q6P1R3 559 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 KDM7AQ6ZMT4 941 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 ARHGAP36Q6ZRI8 547 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 C16orf59Q7L2K0 433 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 TMC7Q7Z402 723 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 IGDCC3Q8IVU1 814 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 RNF168Q8IYW5 571 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 MDM1Q8TC05 714 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 FBF1Q8TES7 1133 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 ARHGEF2Q92974 986 aaKnown RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 RPRD1AQ96P16 312 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 UBP1Q9NZI7 540 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 RSPH14Q9UHP6 348 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 ZMYND8Q9ULU4 1186 aaPredicted RBP7.25□□□□□ -1.25
SMG1-215ENST00000568239 YIPF1Q9Y548 306 aa7.25□□□□□ -1.25
SMG1-215ENST00000568239 MYO9BQ13459 2157 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms