RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 CLEC16AQ2KHT3 1053 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 FNDC3BQ53EP0 1204 aaKnown RBP20.52■□□□□ 0.88
CMTM3-211ENST00000565922 C2CD6Q53TS8 623 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 LPCAT2Q7L5N7 544 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 WFDC5Q8TCV5 224 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 RPRD1AQ96P16 312 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-211ENST00000565922 AGPAT1Q99943 283 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 EDEM3Q9BZQ6 932 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 ARRDC1-AS1Q9H2J1 176 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 FBRSQ9HAH7 460 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 METTL5Q9NRN9 209 aaKnown RBP20.52■□□□□ 0.88
CMTM3-211ENST00000565922 SEMA4GQ9NTN9 838 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 PIGVQ9NUD9 493 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 ARHGEF38Q9NXL2 777 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 ADAM22Q9P0K1 906 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 INVSQ9Y283 1065 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 CFAP54Q96N23 3096 aa20.52■□□□□ 0.87
CMTM3-211ENST00000565922 PAGE1O75459 146 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 RDXP35241 583 aaKnown RBP20.51■□□□□ 0.87
CMTM3-211ENST00000565922 DPP6P42658 865 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 ST8SIA6P61647 398 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 MAP7D1Q3KQU3 841 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 FUT11Q495W5 492 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 OTUD1Q5VV17 481 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-211ENST00000565922 LUZP1Q86V48 1076 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 PHF13Q86YI8 300 aaPredicted RBP20.51■□□□□ 0.87
CMTM3-211ENST00000565922 SLC30A5Q8TAD4 765 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 SORCS1Q8WY21 1168 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 MRGPRX1Q96LB2 322 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 TBCBQ99426 244 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 TKTL2Q9H0I9 626 aa20.51■□□□□ 0.87
CMTM3-211ENST00000565922 AP5Z1O43299 807 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 BCKDHBP21953 392 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 TGM1P22735 817 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 PRKCHP24723 683 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 SDC4P31431 198 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 MPLP40238 635 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 AUHQ13825 339 aaKnown RBP20.5■□□□□ 0.87
CMTM3-211ENST00000565922 NR1I3Q14994 352 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 FBXL22Q6P050 247 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 KIAA1324Q6UXG2 1013 aaKnown RBP20.5■□□□□ 0.87
CMTM3-211ENST00000565922 METTL3Q86U44 580 aaKnown RBP20.5■□□□□ 0.87
CMTM3-211ENST00000565922 CCAR2Q8N163 923 aaKnown RBP20.5■□□□□ 0.87
CMTM3-211ENST00000565922 KDM1BQ8NB78 822 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 CYB5D2Q8WUJ1 264 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 RLN3Q8WXF3 142 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 BAP1Q92560 729 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 TTC17Q96AE7 1141 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 MYEOVQ96EZ4 313 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 LMLNQ96KR4 655 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
CMTM3-211ENST00000565922 PCDHB18PQ96TA0 734 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 NUP58Q9BVL2 599 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 TMEM245Q9H330 911 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 PRDM16Q9HAZ2 1276 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 PARD6AQ9NPB6 346 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 SUN2Q9UH99 717 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 VANGL2Q9ULK5 521 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 HS3ST4Q9Y661 456 aa20.5■□□□□ 0.87
CMTM3-211ENST00000565922 FRYLO94915 3013 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 FAM170AA1A519 330 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 ANKRD62A6NC57 917 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 LRRC53A6NM62 1247 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 SRPRAP08240 638 aaKnown RBP20.49■□□□□ 0.87
CMTM3-211ENST00000565922 ZNF806P0C7X5 589 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 CSKP41240 450 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 FANCCQ00597 558 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 CREB5Q02930 508 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 SULT2A1Q06520 285 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 C1QBPQ07021 282 aaKnown RBP20.49■□□□□ 0.87
CMTM3-211ENST00000565922 ASIC2Q16515 512 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 PTPRNQ16849 979 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 FIGNQ5HY92 759 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 PITRM1Q5JRX3 1037 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 RNF219Q5W0B1 726 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-211ENST00000565922 LRRC31Q6UY01 552 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 PRR23CQ6ZRP0 262 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 CYP2U1Q7Z449 544 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 C12orf50Q8NA57 414 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-211ENST00000565922 C3orf20Q8ND61 904 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 PRCCQ92733 491 aaPredicted RBP20.49■□□□□ 0.87
CMTM3-211ENST00000565922 IQCDQ96DY2 449 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 CFAP57Q96MR6 1250 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 SELENOOQ9BVL4 669 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 SIK2Q9H0K1 926 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 VPS45Q9NRW7 570 aa20.49■□□□□ 0.87
CMTM3-211ENST00000565922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-211ENST00000565922 CLDN11O75508 207 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 TPM3P06753 285 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 ACADMP11310 421 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 KRT3P12035 628 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 DESP17661 470 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 TFE3P19532 575 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-211ENST00000565922 TNFAIP3P21580 790 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 ID4P47928 161 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 DHPSP49366 369 aaPredicted RBP20.48■□□□□ 0.87
CMTM3-211ENST00000565922 CDH4P55283 916 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 UBASH3AP57075 661 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 PTP4A2Q12974 167 aa20.48■□□□□ 0.87
CMTM3-211ENST00000565922 ZNF177Q13360 481 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms