RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CSPG4P5Q96PW8 444 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 XPO6Q96QU8 1125 aaKnown RBP8.03□□□□□ -1.12
CDH1-208ENST00000565810 OSBPL9Q96SU4 736 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 PSMB7Q99436 277 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 NAP1L3Q99457 506 aaPredicted RBP8.03□□□□□ -1.12
CDH1-208ENST00000565810 OSBPL8Q9BZF1 889 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 LINC00597Q9H2U6 94 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 KCNK12Q9HB15 430 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 CWC15Q9P013 229 aaKnown RBP8.03□□□□□ -1.12
CDH1-208ENST00000565810 SNX12Q9UMY4 172 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 EFR3BQ9Y2G0 817 aa8.03□□□□□ -1.12
CDH1-208ENST00000565810 MTCL1Q9Y4B5 1905 aaKnown RBP8.03□□□□□ -1.12
CDH1-208ENST00000565810 IGLV3-10A0A075B6K4 115 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 A0A1B0GVM2 712 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 TCAF2A6NFQ2 919 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAM72CH0Y354 149 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 H0Y626 953 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CES2O00748 559 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 APOL1O14791 398 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CD48P09326 243 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 ERCC2P18074 760 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 AMPD1P23109 780 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CXCR5P32302 372 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 SERPINB6P35237 376 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CDKN2BP42772 138 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 PAFAH1B1P43034 410 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 MAPKAPK2P49137 400 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 OXCT1P55809 520 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RPS24P62847 133 aaKnown RBP8.02□□□□□ -1.13
CDH1-208ENST00000565810 PFKPQ01813 784 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 MMRN1Q13201 1228 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 SEMA3BQ13214 749 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 ZNF211Q13398 564 aaPredicted RBP8.02□□□□□ -1.13
CDH1-208ENST00000565810 CDH18Q13634 790 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RUNX3Q13761 415 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 TUBB2AQ13885 445 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 DHCR24Q15392 516 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 C5orf22Q49AR2 442 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 PREPLQ4J6C6 727 aaPredicted RBP8.02□□□□□ -1.13
CDH1-208ENST00000565810 ANKRD20A8PQ5CZ79 823 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 LY6G5CQ5SRR4 150 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 C6orf118Q5T5N4 469 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAM72AQ5TYM5 149 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 MANEALQ5VSG8 457 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 TRIM68Q6AZZ1 485 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAM72DQ6L9T8 149 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 TMCO3Q6UWJ1 677 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 BZW1Q7L1Q6 419 aaKnown RBP8.02□□□□□ -1.13
CDH1-208ENST00000565810 CHST9Q7L1S5 443 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAM72BQ86X60 149 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 TMEM25Q86YD3 366 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CFAP52Q8N1V2 620 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 CARNMT1Q8N4J0 409 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RIN3Q8TB24 985 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 ALG3Q92685 438 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 IGSF8Q969P0 613 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 EXOC4Q96A65 974 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAF2Q96CS3 445 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 ZFYVE19Q96K21 471 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RNF157Q96PX1 679 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RPP25Q9BUL9 199 aaKnown RBP8.02□□□□□ -1.13
CDH1-208ENST00000565810 TUBB2BQ9BVA1 445 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 BBS2Q9BXC9 721 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 MAGEB5Q9BZ81 275 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 PLA2G2FQ9BZM2 168 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 EBF3Q9H4W6 596 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 ECT2Q9H8V3 914 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 MPP6Q9NZW5 540 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 RNF14Q9UBS8 474 aa8.02□□□□□ -1.13
CDH1-208ENST00000565810 PRUNE2Q8WUY3 3088 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 PATJQ8NI35 1801 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 hCG_1818297A0A087WSY0 165 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 C3orf70A6NLC5 250 aaPredicted RBP8.01□□□□□ -1.13
CDH1-208ENST00000565810 WASH4PA8MWX3 477 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 LOC730098B7Z3J9 87 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 NEDD8-MDP1E9PL57 170 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 CST8O60676 142 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 RAMP2O60895 175 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 URI1O94763 535 aaPredicted RBP8.01□□□□□ -1.13
CDH1-208ENST00000565810 CNTN5O94779 1100 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 LUC7L3O95232 432 aaKnown RBP8.01□□□□□ -1.13
CDH1-208ENST00000565810 RHOCP08134 193 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 ADH5P11766 374 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 KRT10P13645 584 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 TYRP14679 529 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 ARSAP15289 507 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 MX2P20592 715 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 TGM2P21980 687 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 IL4RP24394 825 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 OR1E1P30953 314 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 HOXC13P31276 330 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 PTPN7P35236 360 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 NR2C2P49116 596 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 VCPP55072 806 aaKnown RBP8.01□□□□□ -1.13
CDH1-208ENST00000565810 TDGQ13569 410 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 DPYSQ14117 519 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 LLGL1Q15334 1064 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 TAZQ16635 292 aa8.01□□□□□ -1.13
CDH1-208ENST00000565810 LONRF2Q1L5Z9 754 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms