RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CTSOP43234 321 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 RPS14P62263 151 aaKnown RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ZNF252P-AS1Q0IIN9 211 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 RAPGEF1Q13905 1077 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 DRAP1Q14919 205 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 PLEKHG6Q3KR16 790 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 TCP11X2Q5H9J9 407 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 WDR45BQ5MNZ6 344 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 DCAF12L1Q5VU92 463 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 OTUD1Q5VV17 481 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 SMYD5Q6GMV2 418 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 CIR1Q86X95 450 aaPredicted RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ZCCHC9Q8N567 271 aaKnown RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 MINDY1Q8N5J2 469 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 DEFB124Q8NES8 71 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 CADM4Q8NFZ8 388 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 DNASE2BQ8WZ79 361 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 MRGPRX3Q96LB0 322 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 PRMT1Q99873 361 aaKnown RBP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ASNSD1Q9NWL6 643 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 COX16Q9P0S2 106 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 ANGPTL2Q9UKU9 493 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 SLCO1B1Q9Y6L6 691 aa10.38□□□□□ -0.75
CMTM3-209ENST00000565003 METTL12A8MUP2 240 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 F5H5T6 163 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 H0Y626 953 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 PES1O00541 588 aaKnown RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SIN3BO75182 1162 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 DAB1O75553 588 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 ASLP04424 464 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 UCHL3P15374 230 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 TFE3P19532 575 aaPredicted RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 ACSL1P33121 698 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 KRT9P35527 623 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 NUMBP49757 651 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 IRAK1P51617 712 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 ATXN3P54252 364 aaPredicted RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SHC2P98077 582 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 CDK17Q00537 523 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 GRIK2Q13002 908 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SEMA3BQ13214 749 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 PITRM1Q5JRX3 1037 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 EFHC1Q5JVL4 640 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 KLHDC7AQ5VTJ3 777 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SLC26A9Q7LBE3 791 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 PIP4P1Q86T03 277 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 APCDD1Q8J025 514 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 ATP6V0D2Q8N8Y2 350 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 GPT2Q8TD30 523 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 NOX5Q96PH1 765 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 NAA15Q9BXJ9 866 aaKnown RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 MIR1-1HGQ9H1L0 117 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 C6orf106Q9H6K1 298 aaPredicted RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SYNCQ9H7C4 482 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 FBRSQ9HAH7 460 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 TAB2Q9NYJ8 693 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 SUSD2Q9UGT4 822 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 EIF2B4Q9UI10 523 aaKnown RBP10.37□□□□□ -0.75
CMTM3-209ENST00000565003 NFE2L3Q9Y4A8 694 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 CEP83Q9Y592 693 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 EPG5Q9HCE0 2579 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 CHD8Q9HCK8 2581 aa10.37□□□□□ -0.75
CMTM3-209ENST00000565003 MAP1BP46821 2468 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 A0A1B0GTW7 788 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 TTC34A8MYJ7 566 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 F8VZ95 297 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 OPHN1O60890 802 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 GJB3O75712 270 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 SYPP08247 313 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CYP11B1P15538 503 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 GNSP15586 552 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 ABCB4P21439 1286 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 EEF1GP26641 437 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CCR1P32246 355 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CDH5P33151 784 aaPredicted RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 GGCXP38435 758 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 STK19P49842 368 aaPredicted RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 ST8SIA6P61647 398 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 SLC6A3Q01959 620 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CENPCQ03188 943 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 ZBTB16Q05516 673 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 NME3Q13232 169 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 HNRNPA1L2Q32P51 320 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CT47A1Q5JQC4 288 aaPredicted RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 TAF3Q5VWG9 929 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 ZNF776Q68DI1 518 aaPredicted RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 FBXL22Q6P050 247 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 NOP9Q86U38 636 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CCDC117Q8IWD4 279 aaPredicted RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 DHX40Q8IX18 779 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 CCAR2Q8N163 923 aaKnown RBP10.36□□□□□ -0.75
CMTM3-209ENST00000565003 HDDC3Q8N4P3 179 aa10.36□□□□□ -0.75
CMTM3-209ENST00000565003 ZNF397Q8NF99 534 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms