RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 ANLNQ9NQW6 1124 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.13□□□□□ -0.31
HERC2-206ENST00000564519 NOCTQ9UK39 431 aaKnown RBP13.13□□□□□ -0.31
HERC2-206ENST00000564519 CEP83Q9Y592 693 aa13.13□□□□□ -0.31
HERC2-206ENST00000564519 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 M0QYT0 321 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 ZNF217O75362 1048 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 TPM2P07951 284 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
HERC2-206ENST00000564519 CEACAM1P13688 526 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 CCR1P32246 355 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 NOS2P35228 1153 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 GGCXP38435 758 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 CSKP41240 450 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 GABRB2P47870 512 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 NUMBP49757 651 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 IRAK1P51617 712 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 ATXN3P54252 364 aaPredicted RBP13.12□□□□□ -0.31
HERC2-206ENST00000564519 NOMO3P69849 1222 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 FNDC3BQ53EP0 1204 aaKnown RBP13.12□□□□□ -0.31
HERC2-206ENST00000564519 NAA35Q5VZE5 725 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 LYSMD4Q5XG99 296 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 TRNP1Q6NT89 227 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 C14orf80Q86SX3 495 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 ERICH1Q86X53 443 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 AOPEPQ8N6M6 819 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 ATP6V0D2Q8N8Y2 350 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 RNF34Q969K3 372 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 MYO19Q96H55 970 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 PRDM16Q9HAZ2 1276 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 PLA2G4CQ9UP65 541 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 SDK1Q7Z5N4 2213 aa13.12□□□□□ -0.31
HERC2-206ENST00000564519 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 LRRC10BA6NIK2 292 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 F5H5T6 163 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 GOLGA8SH3BPF8 625 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 I6L893 689 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 GIPC1O14908 333 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 AP5Z1O43299 807 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 POLR2EP19388 210 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 ABCB4P21439 1286 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 RDXP35241 583 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 SOX5P35711 763 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 FLT3P36888 993 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 DPP6P42658 865 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 MATKP42679 507 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 SULT1E1P49888 294 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 SNX16P57768 344 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 IRX4P78413 519 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 FMO1Q01740 532 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 CDR2Q01850 454 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 CENPCQ03188 943 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 UBXN1Q04323 297 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 ZNF33AQ06730 810 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 CAMK2GQ13555 558 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 CDH18Q13634 790 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 TRIM61Q5EBN2 209 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 SPDYCQ5MJ68 293 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 FAM102AQ5T9C2 384 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 CAVIN1Q6NZI2 390 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 SLC36A4Q6YBV0 504 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 ZDHHC17Q8IUH5 632 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 DHX40Q8IX18 779 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 APCDD1Q8J025 514 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 OR2T3Q8NH03 318 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 IGSF8Q969P0 613 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 TTC17Q96AE7 1141 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 SIPA1Q96FS4 1042 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 TOE1Q96GM8 510 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 MRGPRX3Q96LB0 322 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 NPY6RQ99463 290 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 PRSS16Q9NQE7 514 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 ITM2CQ9NQX7 267 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 PIGVQ9NUD9 493 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.11□□□□□ -0.31
HERC2-206ENST00000564519 USP36Q9P275 1121 aaKnown RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 PILRBQ9UKJ0 227 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 SNX10Q9Y5X0 201 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
HERC2-206ENST00000564519 KMT2BQ9UMN6 2715 aaPredicted RBP13.11□□□□□ -0.31
HERC2-206ENST00000564519 MUC22E2RYF6 1773 aaPredicted RBP13.1□□□□□ -0.31
HERC2-206ENST00000564519 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
HERC2-206ENST00000564519 H0Y626 953 aa13.1□□□□□ -0.31
HERC2-206ENST00000564519 PAGE1O75459 146 aa13.1□□□□□ -0.31
HERC2-206ENST00000564519 ADCY5O95622 1261 aa13.1□□□□□ -0.31
HERC2-206ENST00000564519 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
HERC2-206ENST00000564519 CYP1A1P04798 512 aaPredicted RBP13.1□□□□□ -0.31
HERC2-206ENST00000564519 ATP5BP06576 529 aaKnown RBP13.1□□□□□ -0.31
HERC2-206ENST00000564519 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
HERC2-206ENST00000564519 SLC2A3P11169 496 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms