RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 C16orf46Q6P387 395 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 ZNF438Q7Z4V0 828 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 SLC35F3Q8IY50 421 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 TMTC2Q8N394 836 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 PPP1R13BQ96KQ4 1090 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 KIFC3Q9BVG8 833 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 SRRTQ9BXP5 876 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 KRTAP17-1Q9BYP8 105 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 CCSER1Q9C0I3 900 aa11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
HDGFL3-204ENST00000563790 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 AGRPO00253 132 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 SLITRK3O94933 977 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 CXCL8P10145 99 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 GNA11P29992 359 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 NOP2P46087 812 aaKnown RBP11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 NLRP5P59047 1200 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 NOP14P78316 857 aaKnown RBP11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 PDE4CQ08493 712 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 HIST2H2BDQ6DRA6 164 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 CLEC9AQ6UXN8 241 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 MB21D2Q8IYB1 491 aaPredicted RBP11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 OR6B3Q8NGW1 331 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 GLMNQ92990 594 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 MTA3Q9BTC8 594 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 MLXIPLQ9NP71 852 aa11.18□□□□□ -0.62
HDGFL3-204ENST00000563790 PRAMEF26H0Y7S4 382 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 PIRO00625 290 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 MID1O15344 667 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 LRCH4O75427 683 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 RNASEH2AO75792 299 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 PENKP01210 267 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 IRF1P10914 325 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 RECQLP46063 649 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 IST1P53990 364 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 CCL7P80098 99 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 ARID5AQ03989 594 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 TAF10Q12962 218 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 PPP2R5AQ15172 486 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 DEFB133Q30KQ1 61 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 INTS6LQ5JSJ4 861 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 C9orf57Q5W0N0 161 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 PAPD7Q5XG87 772 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 CASC1Q6TDU7 716 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 MOXD1Q6UVY6 613 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 MPZL3Q6UWV2 235 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 RD3Q7Z3Z2 195 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 SPATA2LQ8IUW3 424 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 APLFQ8IW19 511 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 TMEM145Q8NBT3 493 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 TAAR9Q96RI9 348 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 ACBD6Q9BR61 282 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 RABGEF1Q9UJ41 708 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 GTF3C4Q9UKN8 822 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 POLHQ9Y253 713 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
HDGFL3-204ENST00000563790 LOC101059948A0A1B0GTJ6 334 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 ZSCAN5CA6NGD5 496 aaPredicted RBP11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 K7ERI5 159 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CYP21A2P08686 494 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PSEN1P49768 467 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PTK2BQ14289 1009 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CST6Q15828 149 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CCDC142Q17RM4 750 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 SPATA1Q5VX52 437 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 SLC6A19Q695T7 634 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 ZNF517Q6ZMY9 492 aaPredicted RBP11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 OR14C36Q8NHC7 312 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 DNAJB8Q8NHS0 232 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 BICD2Q8TD16 824 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 TBCKQ8TEA7 893 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CCDC12Q8WUD4 166 aaPredicted RBP11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CHTF18Q8WVB6 975 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PMEPA1Q969W9 287 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PNPLA2Q96AD5 504 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 IL12RB2Q99665 862 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 OMDQ99983 421 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 DNAJC28Q9NX36 388 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 CYTH4Q9UIA0 394 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PADI4Q9UM07 663 aa11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 PCDHGA9Q9Y5G4 932 aaKnown RBP11.16□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3DA0A087WVF3 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3IA0A087WXS9 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3EA0A087X179 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3KA0A087X1G2 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3FA6NER0 549 aaPredicted RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 TBC1D3LB9A6J9 549 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 E7EWF7 191 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 AQP9O43315 295 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 RNGTTO60942 597 aaKnown RBP11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 ATP2C2O75185 946 aa11.15□□□□□ -0.62
HDGFL3-204ENST00000563790 RPLP0P05388 317 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms