RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ARF4P18085 180 aaPredicted RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 FGFR4P22455 802 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PROZP22891 400 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ACRV1P26436 265 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 APEX1P27695 318 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 MC4RP32245 332 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ACOT2P49753 483 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 GSDMDP57764 484 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 OSTNP61366 133 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 CYP24A1Q07973 514 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 MGAT3Q09327 533 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 DUSP8Q13202 625 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 SQSTM1Q13501 440 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 FHL2Q14192 279 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PSMD6Q15008 389 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 EXOC3L4Q17RC7 722 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 FBXO47Q5MNV8 452 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ZNF618Q5T7W0 954 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 KRT39Q6A163 491 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TWF2Q6IBS0 349 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 SLC39A4Q6P5W5 647 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 GBP6Q6ZN66 633 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 LARP4Q71RC2 724 aaKnown RBP eCLIP4.95□□□□□ -1.62
CDR2-203ENST00000563573 ANKRD33Q7Z3H0 272 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 CACNA2D4Q7Z3S7 1137 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 FMNL3Q8IVF7 1028 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 C1orf210Q8IVY1 113 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 VSTM4Q8IW00 320 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 AMER2Q8N7J2 671 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ZSWIM2Q8NEG5 633 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 NEK11Q8NG66 645 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PARD3BQ8TEW8 1205 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 THAP3Q8WTV1 239 aaPredicted RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 ASB15Q8WXK1 588 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 EXTL1Q92935 676 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 CCDC127Q96BQ5 260 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PGBD4Q96DM1 585 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ANKRD36BP1Q96IX9 119 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PAWRQ96IZ0 340 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 FAM81BQ96LP2 452 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PPP1R9BQ96SB3 815 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TSPAN18Q96SJ8 248 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 FTHL17Q9BXU8 183 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 EDEM3Q9BZQ6 932 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 IKZF4Q9H2S9 585 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PDZD7Q9H5P4 517 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ASB7Q9H672 318 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 C11orf49Q9H6J7 331 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PLEKHA5Q9HAU0 1116 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PTPRHQ9HD43 1115 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 UBN1Q9NPG3 1134 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 TOPORSQ9NS56 1045 aaPredicted RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 AGPAT5Q9NUQ2 364 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ZNHIT6Q9NWK9 470 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 CPSF3Q9UKF6 684 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 CDC42EP3Q9UKI2 254 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PADI3Q9ULW8 664 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 PIN4Q9Y237 131 aaKnown RBP4.95□□□□□ -1.62
CDR2-203ENST00000563573 ATP11BQ9Y2G3 1177 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 B3GALT1Q9Y5Z6 326 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ITIH6Q6UXX5 1313 aa4.95□□□□□ -1.62
CDR2-203ENST00000563573 ANK1P16157 1881 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TDRD15B5MCY1 1934 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 LRRIQ3A6PVS8 624 aaPredicted RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 AKR1B15C9JRZ8 316 aaPredicted RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 PMM2O15305 246 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 B4GALT5O43286 388 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 CLSTN1O94985 981 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 CD4P01730 458 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 EDN1P05305 212 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 MMEP08473 750 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TMEM191BP0C7N4 346 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 CCDC172P0C7W6 258 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TRIM21P19474 475 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 HOXA11P31270 313 aaPredicted RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 CD52P31358 61 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 FMO5P49326 533 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 RAB27AP51159 221 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TLE2Q04725 743 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 KLF10Q13118 480 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 BIRC3Q13489 604 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TRPC3Q13507 836 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 GRM7Q14831 915 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 SYCP1Q15431 976 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TBR1Q16650 682 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 ARHGAP44Q17R89 818 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 TRIM71Q2Q1W2 868 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 LSM12Q3MHD2 195 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 CRELD2Q6UXH1 353 aaPredicted RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 LRRC8DQ7L1W4 858 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 APTXQ7Z2E3 356 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 CCDC186Q7Z3E2 898 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 NOP9Q86U38 636 aaKnown RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 FAM228AQ86W67 206 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 CDR2LQ86X02 465 aaPredicted RBP4.94□□□□□ -1.62
CDR2-203ENST00000563573 CBWD2Q8IUF1 395 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 WDR49Q8IV35 697 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 CNGA4Q8IV77 575 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 BRSK2Q8IWQ3 736 aa4.94□□□□□ -1.62
CDR2-203ENST00000563573 RPUSD2Q8IZ73 545 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms