RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 DCXO43602 365 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 PRMT3O60678 531 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 MUTP22033 750 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 PAGE2BQ5JRK9 111 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 KCTD8Q6ZWB6 473 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 ELMO2Q96JJ3 720 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 NPAP1Q9NZP6 1156 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 CLIC2O15247 247 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 PDGFRAP16234 1089 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 CYP51A1Q16850 503 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 LCN1P1Q5VSP4 162 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 TMEM26Q6ZUK4 368 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 FAM228AQ86W67 206 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 C12orf43Q96C57 262 aaKnown RBP6.39□□□□□ -1.39
CLK3-212ENST00000563418 NSMCE2Q96MF7 247 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 KLF6Q99612 283 aaPredicted RBP6.39□□□□□ -1.39
CLK3-212ENST00000563418 HGH1Q9BTY7 390 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 ACSS3Q9H6R3 686 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 FBXO6Q9NRD1 293 aaPredicted RBP6.39□□□□□ -1.39
CLK3-212ENST00000563418 TPST1O60507 370 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 USP12O75317 370 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 GARTP22102 1010 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 GLDCP23378 1020 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 VAMP7P51809 220 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 MYLK3Q32MK0 819 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 IL23RQ5VWK5 629 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 ZNF410Q86VK4 478 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 SLC22A9Q8IVM8 553 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 SEPT12Q8IYM1 358 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 CHPFQ8IZ52 775 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 ATP6V0D2Q8N8Y2 350 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 PRICKLE1Q96MT3 831 aaPredicted RBP6.39□□□□□ -1.39
CLK3-212ENST00000563418 MED28Q9H204 178 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 SNTG2Q9NY99 539 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 ERGIC3Q9Y282 383 aa6.39□□□□□ -1.39
CLK3-212ENST00000563418 DHRS12A0PJE2 317 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 KCNJ1P48048 391 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 INO80DQ53TQ3 878 aaPredicted RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 ASB2Q96Q27 587 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 FAM49BQ9NUQ9 324 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 MLH3Q9UHC1 1453 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 NRKQ7Z2Y5 1582 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 UBE2QL1A1L167 161 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZW10O43264 779 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 VAPBO95292 243 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 POU5F1Q01860 360 aaKnown RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 LLGL1Q15334 1064 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SPATS1Q496A3 300 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 RFWD3Q6PCD5 774 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZNF790Q6PG37 636 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 BNIPLQ7Z465 357 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 CYP4X1Q8N118 509 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SIMC1Q8NDZ2 872 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 AGR3Q8TD06 166 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 CHPT1Q8WUD6 406 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 NCSTNQ92542 709 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 RNF34Q969K3 372 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 NLRP3Q96P20 1036 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SLC39A1Q9NY26 324 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 AKAP7Q9P0M2 348 aaPredicted RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 UPP2O95045 317 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 UMPSP11172 480 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 CYP4F8P98187 520 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 TEX47Q8TBZ9 253 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 MTRRQ9UBK8 725 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZNF222Q9UK12 451 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 WRBO00258 174 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SNAP29O95721 258 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 IL7P13232 177 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SESN2P58004 480 aaPredicted RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 FAM109AQ8N4B1 249 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 VPS35Q96QK1 796 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 THAP2Q9H0W7 228 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 TTYH1Q9H313 450 aaPredicted RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 SENP2Q9HC62 589 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 BARHL2Q9NY43 387 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 GSTK1Q9Y2Q3 226 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 A0A1B0GVG6 124 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 MAGEB3O15480 346 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 UGT2B11O75310 529 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 APRTP07741 180 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 TCEA1P23193 301 aaKnown RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 AP3M2P53677 418 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 MPP1Q00013 466 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 NFIL3Q16649 462 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 TAGAPQ8N103 731 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SPATA20Q8TB22 786 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 HERC2P3Q9BVR0 1158 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 LRRC4BQ9NT99 713 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZNHIT2Q9UHR6 403 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZC3H13Q5T200 1668 aaKnown RBP6.38□□□□□ -1.39
CLK3-212ENST00000563418 ZNF879B4DU55 563 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 STMND1H3BQB6 276 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 SERPINA1P01009 418 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 IMPDH1P20839 514 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 STARP49675 285 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 MYL6P60660 151 aa6.38□□□□□ -1.39
CLK3-212ENST00000563418 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms