RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 GGCXP38435 758 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 P2RY2P41231 377 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 SPEM2Q0P670 501 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 CDH18Q13634 790 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 AUHQ13825 339 aaKnown RBP29.24■■■□□ 2.27
NME3-203ENST00000563367 PTPRNQ16849 979 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 C14orf80Q86SX3 495 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 ZNF557Q8N988 423 aaPredicted RBP29.24■■■□□ 2.27
NME3-203ENST00000563367 JOSD2Q8TAC2 188 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 IGSF8Q969P0 613 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 TMPRSS4Q9NRS4 437 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 DMXL1Q9Y485 3027 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 DOCK4Q8N1I0 1966 aa29.24■■■□□ 2.27
NME3-203ENST00000563367 F9P00740 461 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 PBX1P40424 430 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 IRAK1P51617 712 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 UBASH3AP57075 661 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 MAP7D1Q3KQU3 841 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 BRMS1LQ5PSV4 323 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 MON1BQ7L1V2 547 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 MBD1Q9UIS9 605 aaPredicted RBP29.23■■■□□ 2.27
NME3-203ENST00000563367 VANGL2Q9ULK5 521 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 SNX10Q9Y5X0 201 aa29.23■■■□□ 2.27
NME3-203ENST00000563367 H0Y626 953 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 HLA-EP13747 358 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 GSCP56915 257 aaPredicted RBP29.22■■■□□ 2.27
NME3-203ENST00000563367 MTA1Q13330 715 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 E2F5Q15329 346 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 ASIC2Q16515 512 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 RAB6CQ53S08 254 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 SERPINA13PQ6UXR4 307 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 SND1Q7KZF4 910 aaKnown RBP eCLIP29.22■■■□□ 2.276e-7■■□□□ 12.7
NME3-203ENST00000563367 RXFP2Q8WXD0 754 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 TTC17Q96AE7 1141 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 LOXL4Q96JB6 756 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 MRGPRX1Q96LB2 322 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 SIK2Q9H0K1 926 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 RAB6CQ9H0N0 254 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 TMEM245Q9H330 911 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 AIPL1Q9NZN9 384 aa29.22■■■□□ 2.27
NME3-203ENST00000563367 TNRC6BQ9UPQ9 1833 aaKnown RBP29.22■■■□□ 2.27
NME3-203ENST00000563367 DLDP09622 509 aaKnown RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 POLR2EP19388 210 aaKnown RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 TNFAIP3P21580 790 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 CSKP41240 450 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 ATP11AP98196 1134 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 STARD3Q14849 445 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 FNDC3BQ53EP0 1204 aaKnown RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 RABGAP1LQ5R372 815 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 SFMBT2Q5VUG0 894 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 CCDC117Q8IWD4 279 aaPredicted RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 CCAR2Q8N163 923 aaKnown RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 RPRD1AQ96P16 312 aaPredicted RBP29.21■■■□□ 2.27
NME3-203ENST00000563367 EDEM3Q9BZQ6 932 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 TAS2R14Q9NYV8 317 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 PLA2G4CQ9UP65 541 aa29.21■■■□□ 2.27
NME3-203ENST00000563367 GON4LQ3T8J9 2241 aa29.2■■■□□ 2.27
NME3-203ENST00000563367 C2CD4BA6NLJ0 364 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 ENDOD1O94919 500 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 EPN2O95208 641 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 CALB1P05937 261 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 ATP5BP06576 529 aaKnown RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 EPHX1P07099 455 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 PDGFRAP16234 1089 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 RDXP35241 583 aaKnown RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 ELF2Q15723 593 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 C15orf59Q2T9L4 293 aaPredicted RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 CCDC14Q49A88 953 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 PITRM1Q5JRX3 1037 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 SH3PXD2AQ5TCZ1 1133 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 TTC39BQ5VTQ0 682 aaPredicted RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 PMS2CLQ68D20 193 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 ACAD10Q6JQN1 1059 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 APCDD1Q8J025 514 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 ZNF366Q8N895 744 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 MKRN2Q9H000 416 aaKnown RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 ARRDC1-AS1Q9H2J1 176 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 IFNKQ9P0W0 207 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 KIAA1522Q9P206 1035 aaPredicted RBP29.2■■■□□ 2.26
NME3-203ENST00000563367 SPTBN4Q9H254 2564 aa29.2■■■□□ 2.26
NME3-203ENST00000563367 A0A1B0GVM2 712 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 TCRBV5S1A1TA0A578 114 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 TCAF2A6NFQ2 919 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 ZBTB24O43167 697 aaPredicted RBP29.19■■■□□ 2.26
NME3-203ENST00000563367 SYNCRIPO60506 623 aaKnown RBP29.19■■■□□ 2.26
NME3-203ENST00000563367 RHOBTB1O94844 696 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 KRT3P12035 628 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 RFC1P35251 1148 aaPredicted RBP29.19■■■□□ 2.26
NME3-203ENST00000563367 C1QBPQ07021 282 aaKnown RBP29.19■■■□□ 2.26
NME3-203ENST00000563367 C5orf22Q49AR2 442 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 FIGNQ5HY92 759 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 ZNF571Q7Z3V5 609 aaPredicted RBP29.19■■■□□ 2.26
NME3-203ENST00000563367 FAM131BQ86XD5 332 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 ZNF683Q8IZ20 524 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 SPACA7Q96KW9 195 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 HAUS4Q9H6D7 363 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 CD93Q9NPY3 652 aa29.19■■■□□ 2.26
NME3-203ENST00000563367 NFKBIBQ15653 356 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 CCDC6Q16204 474 aa29.18■■■□□ 2.26
NME3-203ENST00000563367 CDO1Q16878 200 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms