RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 BRMS1LQ5PSV4 323 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ARTNQ5T4W7 220 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 PKN3Q6P5Z2 889 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 PHLDB2Q86SQ0 1253 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 C1orf210Q8IVY1 113 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SFTPA1Q8IWL2 248 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SPEM1Q8N4L4 309 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 NAT16Q8N8M0 369 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TERB1Q8NA31 727 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 RXFP2Q8WXD0 754 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TMA16Q96EY4 203 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 MYEOVQ96EZ4 313 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 PRICKLE1Q96MT3 831 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 XPO6Q96QU8 1125 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SLC2A11Q9BYW1 496 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 PRMT8Q9NR22 394 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ARHGEF4Q9NR80 690 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 HCN2Q9UL51 889 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 STARD13Q9Y3M8 1113 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 KIAA1549LQ6ZVL6 1849 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 CACNA1IQ9P0X4 2223 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SSU72P8A0A1W2PR75 194 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TMCO5BA8MYB1 307 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ADCY5O95622 1261 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 CYBBP04839 570 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TDGF1P13385 188 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 PDGFRAP16234 1089 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SDC4P31431 198 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TNFRSF4P43489 277 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 DGKGP49619 791 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SULT1E1P49888 294 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ATXN1P54253 815 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ADKP55263 362 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 NME3Q13232 169 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 C5orf22Q49AR2 442 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 RAB6CQ53S08 254 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SH3PXD2AQ5TCZ1 1133 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 RFWD3Q6PCD5 774 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 STRADAQ7RTN6 431 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 KIAA0907Q7Z7F0 614 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 DNAAF5Q86Y56 855 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 CNGA4Q8IV77 575 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 ATP6V0D2Q8N8Y2 350 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 TC2NQ8N9U0 490 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 CCDC26Q8TAB7 109 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 DDI1Q8WTU0 396 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 NELL1Q92832 810 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 DDX50Q9BQ39 737 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 SELENOOQ9BVL4 669 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 RAB6CQ9H0N0 254 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 WDCPQ9H6R7 721 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 DNAJC17Q9NVM6 304 aaKnown RBP6.41□□□□□ -1.38
CNOT1-204ENST00000563130 C2orf42Q9NWW7 574 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 HCN4Q9Y3Q4 1203 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 WASF2Q9Y6W5 498 aa6.41□□□□□ -1.38
CNOT1-204ENST00000563130 CACNA1HO95180 2353 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 SYNJ2BP-COX16A0A087WUM0 186 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TMEM191CA6NGB0 347 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 PRRT4C9JH25 899 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TSPAN3O60637 253 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 PAGE1O75459 146 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 MOCS2O96007 188 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 APODP05090 189 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 MYBL1P10243 752 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 ABCB4P21439 1286 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TACR2P21452 398 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 HLA-FP30511 346 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 RDXP35241 583 aaKnown RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 ZNF143P52747 638 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 HDAC4P56524 1084 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 RPS24P62847 133 aaKnown RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 MRPS21P82921 87 aaKnown RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 OGDHQ02218 1023 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 DEUP1Q05D60 604 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 ANGPT1Q15389 498 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 C15orf59Q2T9L4 293 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 PREPLQ4J6C6 727 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 GRAMD4Q6IC98 578 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 FBXL22Q6P050 247 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 DNAJC24Q6P3W2 148 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 ALKBH5Q6P6C2 394 aaKnown RBP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TMC6Q7Z403 805 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 VPS36Q86VN1 386 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 ZNF683Q8IZ20 524 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.4□□□□□ -1.38
CNOT1-204ENST00000563130 FNIP1Q8TF40 1166 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 BHMTQ93088 406 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 LMLNQ96KR4 655 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 C1orf74Q96LT6 269 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 MCEEQ96PE7 176 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 CDK15Q96Q40 435 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 CHP1Q99653 195 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 TKTL2Q9H0I9 626 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 PARVAQ9NVD7 372 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 COX16Q9P0S2 106 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 SLC12A6Q9UHW9 1150 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 FBXO4Q9UKT5 387 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 PAXBP1Q9Y5B6 917 aa6.4□□□□□ -1.38
CNOT1-204ENST00000563130 HS3ST4Q9Y661 456 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms