RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 CDCP2Q5VXM1 449 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 MBLAC2Q68D91 279 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 SPOPLQ6IQ16 392 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 FAM173BQ6P4H8 233 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 NCEH1Q6PIU2 408 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 UNC13DQ70J99 1090 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 CHST9Q7L1S5 443 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 ADAT2Q7Z6V5 191 aaKnown RBP8.67□□□□□ -1.02
CKLF-208ENST00000563092 SPATS2Q86XZ4 545 aaKnown RBP8.67□□□□□ -1.02
CKLF-208ENST00000563092 NELFCDQ8IXH7 590 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 ARHGAP18Q8N392 663 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 PDILTQ8N807 584 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 ZNF248Q8NDW4 579 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 WFDC5Q8TCV5 224 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 JAKMIP2Q96AA8 810 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 MRGPRX3Q96LB0 322 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 ZNF578Q96N58 590 aaPredicted RBP8.67□□□□□ -1.02
CKLF-208ENST00000563092 ARID3AQ99856 593 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 APOBEC3GQ9HC16 384 aaKnown RBP8.67□□□□□ -1.02
CKLF-208ENST00000563092 GDF3Q9NR23 364 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 FBXL12Q9NXK8 326 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 GGA2Q9UJY4 613 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 STRIP2Q9ULQ0 834 aa8.67□□□□□ -1.02
CKLF-208ENST00000563092 HBS1LQ9Y450 684 aaKnown RBP8.67□□□□□ -1.02
CKLF-208ENST00000563092 ARID1BQ8NFD5 2236 aaPredicted RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 PVALEFA0A1B0GWK0 134 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 SLC12A8A0AV02 714 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ARHGAP6O43182 974 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 SIN3BO75182 1162 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 IGLV3-27P01718 113 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ATP5BP06576 529 aaKnown RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 SLFN14P0C7P3 912 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 CD70P32970 193 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 GGCXP38435 758 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ARRB1P49407 418 aaPredicted RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 SGSHP51688 502 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 TMPRSS3P57727 454 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ERVPABLB-1P60509 514 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 COPS2P61201 443 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 YWHAGP61981 247 aaKnown RBP eCLIP8.66□□□□□ -1.02
CKLF-208ENST00000563092 ASIC1P78348 528 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 E2F1Q01094 437 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 AMPD3Q01432 767 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ARID5AQ03989 594 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 SRSF1Q07955 248 aaKnown RBP eCLIP8.66□□□□□ -1.02
CKLF-208ENST00000563092 BNIP3Q12983 259 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 CUL4AQ13619 759 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 C9orf64Q5T6V5 341 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 IGF2-ASQ6U949 168 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 IQCHQ86VS3 1027 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 OXR1Q8N573 874 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 MFSD2AQ8NA29 543 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 GOLGA5Q8TBA6 731 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 TMA16Q96EY4 203 aaKnown RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 FAXDC2Q96IV6 333 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 FAM129BQ96TA1 746 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 NEUROG2Q9H2A3 272 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 KCTD10Q9H3F6 313 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 MTG2Q9H4K7 406 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 WDR70Q9NW82 654 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 ARHGAP20Q9P2F6 1191 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 INTS6Q9UL03 887 aaKnown RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 NCKAP1Q9Y2A7 1128 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 PTPN13Q12923 2485 aa8.66□□□□□ -1.02
CKLF-208ENST00000563092 TP53BP1Q12888 1972 aaPredicted RBP8.66□□□□□ -1.02
CKLF-208ENST00000563092 BOD1L1Q8NFC6 3051 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 COL12A1Q99715 3063 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 ITIH6Q6UXX5 1313 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 A0A1W2PP55 124 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 LRRC72A6NJI9 287 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 TRIM38O00635 465 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 MAPK13O15264 365 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 MID1O15344 667 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 WISP1O95388 367 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 MT-CO3P00414 261 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 HLA-DRAP01903 254 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 GIMD1P0DJR0 217 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 LSSP48449 732 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 HARS2P49590 506 aaKnown RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 ADPRHP54922 357 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 PCBP4P57723 403 aaKnown RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 SFSWAPQ12872 951 aaKnown RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 OVGP1Q12889 678 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 CST6Q15828 149 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 TAF1BQ53T94 588 aaPredicted RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 FAM133BQ5BKY9 247 aaKnown RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 PIK3R6Q5UE93 754 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 ARHGAP17Q68EM7 881 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 PIGZQ86VD9 579 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 DHX40Q8IX18 779 aaKnown RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 LSMEM2Q8N112 164 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 SCML4Q8N228 414 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 SLC25A45Q8N413 288 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 AADATQ8N5Z0 425 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 ZNF557Q8N988 423 aaPredicted RBP8.65□□□□□ -1.02
CKLF-208ENST00000563092 FAM181AQ8N9Y4 354 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 LINC00301Q8NCQ3 95 aa8.65□□□□□ -1.02
CKLF-208ENST00000563092 FIBINQ8TAL6 211 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms