RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 GPC3P51654 580 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 SNRPFP62306 86 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 RGS21Q2M5E4 152 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 BBS9Q3SYG4 887 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 ANKRD22Q5VYY1 191 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 TRPC4APQ8TEL6 797 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 SGF29Q96ES7 293 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 TRIM11Q96F44 468 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 KCNK16Q96T55 309 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 MSTO1Q9BUK6 570 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 EPS15L1Q9UBC2 864 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 VPS51Q9UID3 782 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 CDC14AQ9UNH5 594 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 APOBEC2Q9Y235 224 aaKnown RBP14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 USTQ9Y2C2 406 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 IVNS1ABPQ9Y6Y0 642 aa14.39□□□□□ -0.11
GTF3C1-203ENST00000562609 A0A0B4J269 797 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 NOP56O00567 594 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SOCS7O14512 581 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 KDM1AO60341 852 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SULT1C4O75897 302 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 ATE1O95260 518 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 ATF7P17544 494 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 EDNRBP24530 442 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 KCNC4Q03721 635 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TUBB3Q13509 450 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 KCNJ8Q15842 424 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 NRF1Q16656 503 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TDRD10Q5VZ19 366 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 CHERPQ8IWX8 916 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 IQCF2Q8IXL9 164 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TFB1MQ8WVM0 346 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SEPT1Q8WYJ6 367 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 GCOM2Q9BZD3 368 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SLC13A1Q9BZW2 595 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 VPS45Q9NRW7 570 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 GID8Q9NWU2 228 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 RBAKQ9NYW8 714 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 MYRFQ9Y2G1 1151 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 COQ4Q9Y3A0 265 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SGK1O00141 431 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 EXTL3O43909 919 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 CFHP08603 1231 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 GARTP22102 1010 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 EPHX2P34913 555 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 ARL2P36404 184 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 GSSP48637 474 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 OSTNP61366 133 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 PSMC1P62191 440 aaKnown RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 CDK18Q07002 472 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 NR1D2Q14995 579 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 PHKG1Q16816 387 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 RSPH3Q86UC2 560 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM130Q8N3G9 435 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 OR5B17Q8NGF7 314 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TMC2Q8TDI7 906 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 PKP2Q99959 881 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 SIRPGQ9P1W8 387 aa14.38□□□□□ -0.11
GTF3C1-203ENST00000562609 IGKV6D-21A0A0A0MT36 114 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 H3BNH8 94 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ESRRBO95718 433 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 GJA5P36382 358 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ESRRGP62508 458 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 KCTD2Q14681 263 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 HIPK3Q9H422 1215 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 EHD1Q9H4M9 534 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 SACM1LQ9NTJ5 587 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 PLLPQ9Y342 182 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ARHGEF37A1IGU5 675 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 FAM155BO75949 473 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 TCEA1P23193 301 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 MSX2P35548 267 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 NAMPTP43490 491 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 BMXP51813 675 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 KRT80Q6KB66 452 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 METTL7BQ6UX53 244 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 VASH1Q7L8A9 365 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 WDR75Q8IWA0 830 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 CPA5Q8WXQ8 436 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 RMND5BQ96G75 393 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 MMP19Q99542 508 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 SIAEQ9HAT2 523 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 XAB2Q9HCS7 855 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 NRBP2Q9NSY0 501 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 ZNFX1Q9P2E3 1918 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 A0A1W2PPW3 197 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 GIPC1O14908 333 aa14.37□□□□□ -0.11
GTF3C1-203ENST00000562609 SNNO75324 88 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms