RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 TRIM61Q5EBN2 209 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 CT47A1Q5JQC4 288 aaPredicted RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PITRM1Q5JRX3 1037 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 TRNP1Q6NT89 227 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 C11orf74Q86VG3 221 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 XYLT1Q86Y38 959 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 DHX40Q8IX18 779 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 AHI1Q8N157 1196 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 EPS8L1Q8TE68 723 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 WFIKKN2Q8TEU8 576 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PRCCQ92733 491 aaPredicted RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 IGSF8Q969P0 613 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 C18orf8Q96DM3 657 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 SIPA1Q96FS4 1042 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 RPL10LQ96L21 214 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 RPRD1AQ96P16 312 aaPredicted RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 SPAG5Q96R06 1193 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PCDHB18PQ96TA0 734 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 C11orf70Q9BRQ4 267 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 RTKNQ9BST9 563 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 GTPBP2Q9BX10 602 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 MIR1-1HGQ9H1L0 117 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 HSD3B7Q9H2F3 369 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 METTL5Q9NRN9 209 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PIGVQ9NUD9 493 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 LIMA1Q9UHB6 759 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PLA2G4CQ9UP65 541 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 PI4KAP42356 2102 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 NCOR2Q9Y618 2525 aa9.8□□□□□ -0.84
NSMCE1-203ENST00000562039 LNP1A1A4G5 178 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 LGALS16A8MUM7 142 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 MEI4A8MW99 385 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 KCNU1A8MYU2 1149 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 TEX33O43247 280 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 AP5Z1O43299 807 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 PAGE1O75459 146 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CNTN5O94779 1100 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ACADMP11310 421 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 VAV1P15498 845 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ZNF18P17022 549 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ABCB4P21439 1286 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CCR1P32246 355 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 NOS2P35228 1153 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SOX5P35711 763 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 FLT3P36888 993 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ZNF445P59923 1031 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 NOMO3P69849 1222 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ATP11AP98196 1134 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 FMO1Q01740 532 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 DEUP1Q05D60 604 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 EIF4HQ15056 248 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CDO1Q16878 200 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 PPM1JQ5JR12 505 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 FBXL22Q6P050 247 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SLC36A4Q6YBV0 504 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SLC26A9Q7LBE3 791 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 DNAAF5Q86Y56 855 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CCDC117Q8IWD4 279 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CCAR2Q8N163 923 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ANKRD20A12PQ8NF67 263 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 NEK11Q8NG66 645 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 OR52K2Q8NGK3 314 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 FIBINQ8TAL6 211 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 GANCQ8TET4 914 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SNX19Q92543 992 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 AZIN2Q96A70 460 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 LMLNQ96KR4 655 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 BTN2A3PQ96KV6 586 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 CFAP57Q96MR6 1250 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 PRMT1Q99873 361 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 TRIM62Q9BVG3 475 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 TKTL2Q9H0I9 626 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 PRSS16Q9NQE7 514 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 ASNSD1Q9NWL6 643 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SLC12A6Q9UHW9 1150 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 SLCO3A1Q9UIG8 710 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 NOCTQ9UK39 431 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 HS3ST4Q9Y661 456 aa9.79□□□□□ -0.84
NSMCE1-203ENST00000562039 FAM47DPA6NHR8 397 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 I6L893 689 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 PLK4O00444 970 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 GIPC1O14908 333 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 TIMM44O43615 452 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 BNIP3LO60238 219 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 SIN3BO75182 1162 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ZNF217O75362 1048 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ATP5BP06576 529 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 GLI1P08151 1106 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 DLDP09622 509 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 CD6P30203 668 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 CDH5P33151 784 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 STAT1P42224 750 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 MATKP42679 507 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 TPMTP51580 245 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 JAM2P57087 298 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 ST8SIA6P61647 398 aa9.78□□□□□ -0.84
NSMCE1-203ENST00000562039 RPS14P62263 151 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms