RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 RUSC1Q9BVN2 902 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 BBS2Q9BXC9 721 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 BTBD1Q9H0C5 482 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ABCG4Q9H172 646 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 OSBPL2Q9H1P3 480 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 GDF3Q9NR23 364 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 AASDHPPTQ9NRN7 309 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ARHGAP28Q9P2N2 729 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 STOML1Q9UBI4 398 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 GTF3C4Q9UKN8 822 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 SATB2Q9UPW6 733 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 PLAAQ9Y263 795 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ADGRG4Q8IZF6 3080 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 CSMD1Q96PZ7 3565 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 A1L4Q6 167 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 FAM47DPA6NHR8 397 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 KPNA7A9QM74 516 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CPLX1O14810 134 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 NPC1O15118 1278 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CYP26A1O43174 497 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 SIGLEC6O43699 453 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CACNG3O60359 315 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 OLFM2O95897 454 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 OAS1P00973 400 aaKnown RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 HMGB1P09429 215 aaKnown RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 IRF1P10914 325 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CPA1P15085 419 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 ANXA13P27216 316 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CASRP41180 1078 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 PPP3CCP48454 512 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CDH8P55286 799 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 PTPRJQ12913 1337 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 ENOX2Q16206 610 aaKnown RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 TBR1Q16650 682 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 KYAT1Q16773 422 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CCDC142Q17RM4 750 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 KRTAP21-3Q3LHN1 58 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CFAP221Q4G0U5 840 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 HS1BP3Q53T59 392 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CDCP2Q5VXM1 449 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 FAM177A1Q8N128 213 aaPredicted RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 ARID1BQ8NFD5 2236 aaPredicted RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 UCMAQ8WVF2 138 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 TMEM131Q92545 1883 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 HPS3Q969F9 1004 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 FUBP3Q96I24 572 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERC1-213ENST00000561359 SLC6A18Q96N87 628 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 SLITRK1Q96PX8 696 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 TSPAN18Q96SJ8 248 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 ACBD6Q9BR61 282 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 GZF1Q9H116 711 aaPredicted RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 LHX5Q9H2C1 402 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 BHMT2Q9H2M3 363 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 ZFP64Q9NPA5 681 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 GEMIN8Q9NWZ8 242 aaKnown RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 DDX43Q9NXZ2 648 aaKnown RBP5.61□□□□□ -1.51
HERC1-213ENST00000561359 EHD2Q9NZN4 543 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 WDR35Q9P2L0 1181 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 CELSR1Q9NYQ6 3014 aa5.61□□□□□ -1.51
HERC1-213ENST00000561359 SPG11Q96JI7 2443 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 OBSL1O75147 1896 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 ANK1P16157 1881 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 A0A1W2PPC4 97 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 VPS37CA5D8V6 355 aaPredicted RBP5.6□□□□□ -1.51
HERC1-213ENST00000561359 CDRT15L2A8MXV6 281 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 COCHO43405 550 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 NEMFO60524 1076 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 HUS1O60921 280 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 HIP1RO75146 1068 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 TNFSF15O95150 251 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 WNT1P04628 370 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 EPHX1P07099 455 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 BDNFP23560 247 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 RPA1P27694 616 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 CD38P28907 300 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 PCSK1P29120 753 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 MAGEA11P43364 429 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 DUSP3P51452 185 aaPredicted RBP5.6□□□□□ -1.51
HERC1-213ENST00000561359 COPAP53621 1224 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 IFRD2Q12894 506 aaPredicted RBP5.6□□□□□ -1.51
HERC1-213ENST00000561359 TAF10Q12962 218 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 KRT32Q14532 448 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 SV2CQ496J9 727 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 EARS2Q5JPH6 523 aaKnown RBP5.6□□□□□ -1.51
HERC1-213ENST00000561359 ARTNQ5T4W7 220 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 SFMBT2Q5VUG0 894 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 TDRD10Q5VZ19 366 aaKnown RBP5.6□□□□□ -1.51
HERC1-213ENST00000561359 HGSNATQ68CP4 663 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 ANKRD34AQ69YU3 496 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 SERPINA13PQ6UXR4 307 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 ZPBP2Q6X784 338 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 C4orf50Q6ZRC1 276 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 KANSL1Q7Z3B3 1105 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 TMC6Q7Z403 805 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 VN1R5Q7Z5H4 357 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 CD302Q8IX05 232 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 PDCL2Q8N4E4 241 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 ARL14Q8N4G2 192 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 OR2T3Q8NH03 318 aa5.6□□□□□ -1.51
HERC1-213ENST00000561359 ERMNQ8TAM6 284 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms