RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 PPP4R4Q6NUP7 873 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 USP17L6PQ6QN14 398 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 CCDC28AQ8IWP9 274 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 FAM177A1Q8N128 213 aaPredicted RBP3.72□□□□□ -1.81
USP8-216ENST00000561206 PAQR4Q8N4S7 273 aaPredicted RBP3.72□□□□□ -1.81
USP8-216ENST00000561206 PRR26Q8N8Z3 221 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 CLEC18CQ8NCF0 446 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 LRRC46Q96FV0 321 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 ZNF347Q96SE7 839 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 SEZ6LQ9BYH1 1024 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 PNPLA8Q9NP80 782 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 B3GNT3Q9Y2A9 372 aa3.72□□□□□ -1.81
USP8-216ENST00000561206 LOC105371045A0A1W2PR82 267 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 GAGE12JA6NER3 117 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 FOXO6A8MYZ6 492 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 AREL1O15033 823 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 ZSCAN9O15535 394 aaPredicted RBP3.71□□□□□ -1.82
USP8-216ENST00000561206 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 HOXC13P31276 330 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 RASSF2P50749 326 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 CRYZQ08257 329 aaKnown RBP3.71□□□□□ -1.82
USP8-216ENST00000561206 ATP1A4Q13733 1029 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 PPP2R5AQ15172 486 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 SHBQ15464 509 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 Q5PR19 223 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 C16orf89Q6UX73 402 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 KIAA0408Q6ZU52 694 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 GPSM1Q86YR5 675 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 URB1-AS1Q96HZ7 61 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 NUDT22Q9BRQ3 303 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 DCLK3Q9C098 648 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 ISCUQ9H1K1 167 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 C6orf106Q9H6K1 298 aaPredicted RBP3.71□□□□□ -1.82
USP8-216ENST00000561206 PLAC1Q9HBJ0 212 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 KRCC1Q9NPI7 259 aaPredicted RBP3.71□□□□□ -1.82
USP8-216ENST00000561206 PCDHGB6Q9Y5F9 930 aa3.71□□□□□ -1.82
USP8-216ENST00000561206 A0A0B4J293 547 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 GXYLT2A0PJZ3 443 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 CNTN5O94779 1100 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 CPA1P15085 419 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 TGM2P21980 687 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 Q0VFX4 171 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 GALEQ14376 348 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 SLC5A9Q2M3M2 681 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 CYB5RLQ6IPT4 315 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 HMBOX1Q6NT76 420 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 KDELC2Q7Z4H8 507 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 CTU1Q7Z7A3 348 aaKnown RBP3.7□□□□□ -1.82
USP8-216ENST00000561206 PHKBQ93100 1093 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 EIF3CQ99613 913 aaKnown RBP3.7□□□□□ -1.82
USP8-216ENST00000561206 ABHD14AQ9BUJ0 271 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 MAGEB5Q9BZ81 275 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 TM6SF1Q9BZW5 370 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 NUP62CLQ9H1M0 184 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 PRDM16Q9HAZ2 1276 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 SNX13Q9Y5W8 968 aa3.7□□□□□ -1.82
USP8-216ENST00000561206 COL2A1P02458 1487 aaPredicted RBP3.7□□□□□ -1.82
USP8-216ENST00000561206 VSTM5A8MXK1 200 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 INAFM1C9JVW0 142 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 VIPP01282 170 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 MYL4P12829 197 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 KRT2P35908 639 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 ART1P52961 327 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 CBFBQ13951 182 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 FAM83HQ6ZRV2 1179 aaPredicted RBP3.69□□□□□ -1.82
USP8-216ENST00000561206 Q6ZTK2 550 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 CYB5R4Q7L1T6 521 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 KRT27Q7Z3Y8 459 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 EXD3Q8N9H8 876 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 ATP11CQ8NB49 1132 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 KAT2AQ92830 837 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 GRAMD1AQ96CP6 724 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 IL21RQ9HBE5 538 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 KCNK9Q9NPC2 374 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 CORO2BQ9UQ03 480 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 UBE2J1Q9Y385 318 aaPredicted RBP3.69□□□□□ -1.82
USP8-216ENST00000561206 PCDHB7Q9Y5E2 793 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 PCDHGB1Q9Y5G3 927 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 PTGDR2Q9Y5Y4 395 aa3.69□□□□□ -1.82
USP8-216ENST00000561206 FRMPD2Q68DX3 1309 aaPredicted RBP3.69□□□□□ -1.82
USP8-216ENST00000561206 SHROOM4Q9ULL8 1493 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 OR6C75A6NL08 312 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 BECN2A8MW95 431 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 DHHO43323 396 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 RGS14O43566 566 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 NFATC1O95644 943 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 SERPINB2P05120 415 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 PKMP14618 531 aaKnown RBP3.68□□□□□ -1.82
USP8-216ENST00000561206 FGFR2P21802 821 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 PCYT1AP49585 367 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 SLC37A1P57057 533 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 KRTAP10-8P60410 259 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 ERVFC1-1P60608 527 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 GPS2Q13227 327 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 P3H1Q32P28 736 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 KLHDC7AQ5VTJ3 777 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 RAP1GAP2Q684P5 730 aa3.68□□□□□ -1.82
USP8-216ENST00000561206 ADGRF3Q8IZF5 1079 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms