RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TTC30AQ86WT1 665 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PDPRQ8NCN5 879 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TCRBV3S1A0A5B6 114 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 TBC1D12O60347 775 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 GCATO75600 419 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 TRPA1O75762 1119 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 CDH3P22223 829 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 KCNA4P22459 653 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 WNT7BP56706 349 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 RHDQ02161 417 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 SLC10A2Q12908 348 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 SLC9B1Q4ZJI4 515 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 KCTD6Q8NC69 237 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 ZNF641Q96N77 438 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 COQ10BQ9H8M1 238 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 TCF7L2Q9NQB0 619 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 ERGIC3Q9Y282 383 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 GPC6Q9Y625 555 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 H3BMQ9 156 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 HTRA2O43464 458 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 DPP6P42658 865 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 CCR3P51677 355 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 NFIAQ12857 509 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 MTM1Q13496 603 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 UGCGQ16739 394 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 ABCB5Q2M3G0 1257 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 VWA5B1Q5TIE3 1220 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 CYP4V2Q6ZWL3 525 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 DEPDC1BQ8WUY9 529 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 COG8Q96MW5 612 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 WRNIP1Q96S55 665 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 NPLQ9BXD5 320 aaPredicted RBP16.44■□□□□ 0.22
PBX1-219ENST00000560641 SLC4A5Q9BY07 1137 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 C8orf4Q9NR00 106 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 ADAM28Q9UKQ2 775 aa16.44■□□□□ 0.22
PBX1-219ENST00000560641 KRT3P12035 628 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 PTPN2P17706 415 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 GALNT4Q8N4A0 578 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 VPS33BQ9H267 617 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 MRGBPQ9NV56 204 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 RBAKQ9NYW8 714 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 CNTNAP2Q9UHC6 1331 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 K7EPI3 171 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 TPP1O14773 563 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 HNRNPDLO14979 420 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 ZMPSTE24O75844 475 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 BMP2P12643 396 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 CYTH1Q15438 398 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 TKFCQ3LXA3 575 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 ZNF362Q5T0B9 420 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 ITPRIPL1Q6GPH6 555 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 SNX32Q86XE0 403 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 ZFPM1Q8IX07 1006 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 MINDY2Q8NBR6 621 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 ACO2Q99798 780 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 SHCBP1LQ9BZQ2 653 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 WDR41Q9HAD4 459 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 HEY1Q9Y5J3 304 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 C9IYK1 514 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 TOP3BO95985 862 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 EIF2AK2P19525 551 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 S100A1P23297 94 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 SLC7A1P30825 629 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 PRKAA2P54646 552 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 SMTNL2Q2TAL5 461 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 CLVS1Q8IUQ0 354 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 TMEM79Q9BSE2 394 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 XPNPEP3Q9NQH7 507 aa16.43■□□□□ 0.22
PBX1-219ENST00000560641 CTDP1Q9Y5B0 961 aaPredicted RBP16.43■□□□□ 0.22
PBX1-219ENST00000560641 SSC5DA1L4H1 1573 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 ZNF541Q9H0D2 1346 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 ATE1O95260 518 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 TNNI1P19237 187 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 FRG1Q14331 258 aaKnown RBP16.42■□□□□ 0.22
PBX1-219ENST00000560641 INTS11Q5TA45 600 aaKnown RBP16.42■□□□□ 0.22
PBX1-219ENST00000560641 SH3BP5LQ7L8J4 393 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 PCYOX1LQ8NBM8 494 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 KIFC3Q9BVG8 833 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 YTHDF1Q9BYJ9 559 aaKnown RBP16.42■□□□□ 0.22
PBX1-219ENST00000560641 VRTNQ9H8Y1 702 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 EFCAB1Q9HAE3 211 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 ZBTB26Q9HCK0 441 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 MTMR10Q9NXD2 777 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 NCKIPSDQ9NZQ3 722 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 AKAP10O43572 662 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 ZBTB11O95625 1053 aaPredicted RBP16.42■□□□□ 0.22
PBX1-219ENST00000560641 YWHAEP62258 255 aaKnown RBP16.42■□□□□ 0.22
PBX1-219ENST00000560641 NSUN2Q08J23 767 aaKnown RBP eCLIP16.42■□□□□ 0.224e-10■■■■■ 43.5
PBX1-219ENST00000560641 SLC9A4Q6AI14 798 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 KRT80Q6KB66 452 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 JOSD2Q8TAC2 188 aa16.42■□□□□ 0.22
PBX1-219ENST00000560641 MAPK15Q8TD08 544 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms