RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 FAM129BQ96TA1 746 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 NT5C1AQ9BXI3 368 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 CAAP1Q9H8G2 361 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 INTS6Q9UL03 887 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 STRIP2Q9ULQ0 834 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 CACNA1DQ01668 2161 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 RELNP78509 3460 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3DA0A087WVF3 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3IA0A087WXS9 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3EA0A087X179 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3KA0A087X1G2 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 A0A1B0GVM2 712 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3FA6NER0 549 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3LB9A6J9 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 EXOC3O60645 756 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 RNASEH1O60930 286 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 ASS1P00966 412 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3HP0C7X1 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 MYF5P13349 255 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 P4HA1P13674 534 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 GOT1P17174 413 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 HARS2P49590 506 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 YWHAGP61981 247 aaKnown RBP eCLIP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 NFKB2Q00653 900 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 ARL13BQ3SXY8 428 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 ZACNQ401N2 412 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 RAB41Q5JT25 222 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 ADGRF1Q5T601 910 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3GQ6DHY5 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3CQ6IPX1 549 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 NAPEPLDQ6IQ20 393 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 IGF2-ASQ6U949 168 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 RSRC2Q7L4I2 434 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TMC6Q7Z403 805 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TBC1D3Q8IZP1 549 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 OR4C6Q8NH72 309 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TAF4BQ92750 862 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 PRR11Q96HE9 360 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 TMX3Q96JJ7 454 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC46A1Q96NT5 459 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 OSBPL2Q9H1P3 480 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 THSD1Q9NS62 852 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 UCKL1Q9NWZ5 548 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 SFMBT1Q9UHJ3 866 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 SATB2Q9UPW6 733 aa9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 HEMK1Q9Y5R4 338 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-217ENST00000560521 LRRK1Q38SD2 2015 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 LY6G6EA0A0G2JKS1 128 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 GOLGA6L7A0A1B0GV03 622 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 TARSL2A2RTX5 802 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 TTC34A8MYJ7 566 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 EFSO43281 561 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 EIF5BO60841 1220 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 TBL1XO60907 577 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 NTRK1P04629 796 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 RPN1P04843 607 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 SLFN14P0C7P3 912 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 CKMT1AP12532 417 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ITGB6P18564 788 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 DGKAP23743 735 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 MAT2AP31153 395 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC6A4P31645 630 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 CSKP41240 450 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PSMD8P48556 350 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ZNF445P59923 1031 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ST8SIA6P61647 398 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 CEBPZQ03701 1054 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 E2F4Q16254 413 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ISXQ2M1V0 245 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 C3orf38Q5JPI3 329 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 FAM26FQ5R3K3 315 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PIK3R6Q5UE93 754 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PM20D1Q6GTS8 502 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 RFWD3Q6PCD5 774 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 SV2AQ7L0J3 742 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 BHLHA9Q7RTU4 235 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PRPF39Q86UA1 669 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PIGZQ86VD9 579 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 IQCHQ86VS3 1027 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ARHGAP18Q8N392 663 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PTPRN2Q92932 1015 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 APOLD1Q96LR9 279 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 UBXN6Q9BZV1 441 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 APOBEC3GQ9HC16 384 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 KBTBD4Q9NVX7 518 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 SLCO3A1Q9UIG8 710 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 ERVW-1Q9UQF0 538 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 CA5BQ9Y2D0 317 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 HBS1LQ9Y450 684 aaKnown RBP9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 U3KQA8 63 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 UBE4BO95155 1302 aa9.29□□□□□ -0.92
RABGGTA-217ENST00000560521 PMS2P1A4D2B8 440 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms