RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 HYOU1Q9Y4L1 999 aa12.65□□□□□ -0.38
USP8-209ENST00000560297 PCDHA3Q9Y5H8 950 aa12.65□□□□□ -0.38
USP8-209ENST00000560297 PIAS3Q9Y6X2 628 aa12.65□□□□□ -0.38
USP8-209ENST00000560297 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 SPECC1L-ADORA2AF8WAN1 911 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 H3BRJ5 948 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 DAPK3O43293 454 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 DCXO43602 365 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CREB3O43889 395 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 ALADP13716 330 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 RHOQP17081 205 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MSNP26038 577 aaKnown RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 HOXD9P28356 352 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 EPHB2P29323 1055 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 HOXC13P31276 330 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CTHP32929 405 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CDH6P55285 790 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 TPI1P60174 286 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 ZNF177Q13360 481 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 KRT81Q14533 505 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MLF2Q15773 248 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 CA9Q16790 459 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 PPP6R3Q5H9R7 873 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 TXNRD3NBQ6F5E7 133 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 RWDD4Q6NW29 188 aaKnown RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 NT5DC3Q86UY8 548 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 VSIG1Q86XK7 387 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CPNE8Q86YQ8 564 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 ETFBKMTQ8IXQ9 262 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 RCOR2Q8IZ40 523 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CFAP52Q8N1V2 620 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 UBL4BQ8N7F7 174 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FIBINQ8TAL6 211 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 FAM71BQ8TC56 605 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 EDAQ92838 391 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CD101Q93033 1021 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 BHMTQ93088 406 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MYEOVQ96EZ4 313 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 PRICKLE1Q96MT3 831 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 KCTD15Q96SI1 283 aaPredicted RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 NELL2Q99435 816 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MAGEB5Q9BZ81 275 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 GOLPH3Q9H4A6 298 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 GPATCH2LQ9NWQ4 482 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 PLK2Q9NYY3 685 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MRPS17Q9Y2R5 130 aaKnown RBP12.64□□□□□ -0.39
USP8-209ENST00000560297 SNX10Q9Y5X0 201 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 CAPN6Q9Y6Q1 641 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 MYO10Q9HD67 2058 aa12.64□□□□□ -0.39
USP8-209ENST00000560297 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 WASH4PA8MWX3 477 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ZNF487B1APH4 448 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 H0Y626 953 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 EEF2KO00418 725 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 KIF5CO60282 957 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ZRANB2O95218 330 aaKnown RBP eCLIP12.63□□□□□ -0.39
USP8-209ENST00000560297 LUC7L3O95232 432 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 SLC34A2O95436 690 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 TNNT1P13805 278 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 KDELR1P24390 212 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CTNNA2P26232 953 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 GJC1P36383 396 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 GGCXP38435 758 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CETN2P41208 172 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 SGSHP51688 502 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ARSEP51690 589 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 SLC12A1Q13621 1099 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CDH18Q13634 790 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 GAB4Q2WGN9 574 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ARTNQ5T4W7 220 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ZNF852Q6ZMS4 543 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 RFX8Q6ZV50 586 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 SETD3Q86TU7 594 aaPredicted RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 MFN1Q8IWA4 741 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 KATNAL2Q8IYT4 538 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CARNMT1Q8N4J0 409 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 NAT16Q8N8M0 369 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 PNKPQ96T60 521 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 P2RY13Q9BPV8 354 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 PRDM16Q9HAZ2 1276 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 ARHGEF3Q9NR81 526 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 DNAJC17Q9NVM6 304 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 TMEM248Q9NWD8 314 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 MPP6Q9NZW5 540 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 CWC15Q9P013 229 aaKnown RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 KIAA1522Q9P206 1035 aaPredicted RBP12.63□□□□□ -0.39
USP8-209ENST00000560297 TBC1D30Q9Y2I9 924 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 SLC27A6Q9Y2P4 619 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
USP8-209ENST00000560297 HELZP42694 1942 aaKnown RBP12.62□□□□□ -0.39
USP8-209ENST00000560297 A0A0A0MRY4 1105 aa12.62□□□□□ -0.39
USP8-209ENST00000560297 LRRD1A4D1F6 860 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms