RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GALNT18Q6P9A2 607 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ARMC8Q8IUR7 673 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAFFQ9ULX9 164 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 UBQLN1Q9UMX0 589 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 FGFR1P11362 822 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 PLD1Q13393 1074 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TXNDC11Q6PKC3 985 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 UBE2Q1Q7Z7E8 422 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 PEX5LQ8IYB4 626 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ADSSL1Q8N142 457 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 CARNMT1Q8N4J0 409 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 QRFPRQ96P65 431 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF184Q99676 751 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 AIF1LQ9BQI0 150 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZCCHC2Q9C0B9 1178 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 NUP50Q9UKX7 468 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TDRKHQ9Y2W6 561 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L15C9J2P7 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L13C9JLJ4 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L11C9JVI0 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L18D6R9N7 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L22D6RA61 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L17D6RBQ6 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L19D6RCP7 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L20D6RJB6 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 TSPAN4O14817 238 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 PRH1P02810 166 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L24Q0WX57 530 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 GRM4Q14833 912 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 EPHA7Q15375 998 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ANKRD26P1Q6NSI1 321 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L6PQ6QN14 398 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 GLB1LQ6UWU2 654 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 FBXO36Q8NEA4 188 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 OR56A4Q8NGH8 313 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 MCOLN3Q8TDD5 553 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 HPS1Q92902 700 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 MCCC1Q96RQ3 725 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 CDADC1Q9BWV3 514 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 UPB1Q9UBR1 384 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAGEB2O15479 319 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 APOL3O95236 402 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ETS1P14921 441 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACTR3P61158 418 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 PSMD5Q16401 504 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACAD10Q6JQN1 1059 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 GPALPP1Q8IXQ4 340 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 LENG1Q96BZ8 264 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 AP4E1Q9UPM8 1137 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 HSD3B1P14060 373 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 UCHL3P15374 230 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ATF6P18850 670 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 RIPK1Q13546 671 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 LMBRD2Q68DH5 695 aaPredicted RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 HIPK1Q86Z02 1210 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 EMC1Q8N766 993 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 SLC4A11Q8NBS3 891 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 UBA3Q8TBC4 463 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 SKA1Q96BD8 255 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 NUDT12Q9BQG2 462 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 NDOR1Q9UHB4 597 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 A2MP01023 1474 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 OR5F1O95221 314 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 PDHBP11177 359 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 EPS8L3Q8TE67 593 aaKnown RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 MYO10Q9HD67 2058 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 RHOBTB3O94955 611 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 UBA1P22314 1058 aaKnown RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ME2P23368 584 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 TNK2Q07912 1038 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 FRG1Q14331 258 aaKnown RBP14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 SULT1C3Q6IMI6 304 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACOT12Q8WYK0 555 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 PIGKQ92643 395 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 FAM118BQ9BPY3 351 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMBIM4Q9HC24 238 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 MNDAP41218 407 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 PDX1P52945 283 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ERFEQ4G0M1 354 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 SNX7Q9UNH6 387 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 ST3GAL5Q9UNP4 418 aa14.11□□□□□ -0.15
CSPG4P12-202ENST00000559989 IRGCQ6NXR0 463 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 KAT2BQ92831 832 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TRNT1Q96Q11 434 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMEM253P0C7T8 217 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 MTA1Q13330 715 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 CSHL1Q14406 222 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 BOLA3Q53S33 107 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 PERM1Q5SV97 790 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 LRRC69Q6ZNQ3 347 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 RBM43Q6ZSC3 357 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TRMT11Q7Z4G4 463 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 FAM126BQ8IXS8 530 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 PTCD2Q8WV60 388 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 WRNIP1Q96S55 665 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMEM260Q9NX78 707 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms