RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 RNF219Q5W0B1 726 aaPredicted RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 TCEAL6Q6IPX3 200 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 SLC36A4Q6YBV0 504 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 TRIM72Q6ZMU5 477 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 ADIPOR2Q86V24 386 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 XYLT1Q86Y38 959 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNX1-207ENST00000559401 SLC30A5Q8TAD4 765 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 FIBINQ8TAL6 211 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 PRCCQ92733 491 aaPredicted RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 TCEAL3Q969E4 200 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 SIPA1Q96FS4 1042 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 MRGPRX1Q96LB2 322 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 SIK2Q9H0K1 926 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 HSD3B7Q9H2F3 369 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 VPS45Q9NRW7 570 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 PIGVQ9NUD9 493 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 VANGL2Q9ULK5 521 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 PAXBP1Q9Y5B6 917 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 TNRC6BQ9UPQ9 1833 aaKnown RBP8.47□□□□□ -1.05
SNX1-207ENST00000559401 SPTBN4Q9H254 2564 aa8.47□□□□□ -1.05
SNX1-207ENST00000559401 IGHV1OR15-9A0A0B4J2B8 117 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 A0A1B0GVM2 712 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 BCLAF3A2AJT9 711 aaKnown RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 TCAF2A6NFQ2 919 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 LRRC10BA6NIK2 292 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 GOLGA6L19H0YKK7 550 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 PAGE1O75459 146 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 ASLP04424 464 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 CCDC172P0C7W6 258 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 ZNF806P0C7X5 589 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 PDGFRAP16234 1089 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 FERP16591 822 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 CHRNB2P17787 502 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 TFE3P19532 575 aaPredicted RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 TGM1P22735 817 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 SCNN1AP37088 669 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 PTGER3P43115 390 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 ATP11AP98196 1134 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 MTA1Q13330 715 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 AUHQ13825 339 aaKnown RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 PUM1Q14671 1186 aaKnown RBP eCLIP8.46□□□□□ -1.06
SNX1-207ENST00000559401 CDO1Q16878 200 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 SLC25A52Q3SY17 297 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 FSCBQ5H9T9 825 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 PITRM1Q5JRX3 1037 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 BRMS1LQ5PSV4 323 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 TTC39BQ5VTQ0 682 aaPredicted RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 OTUD1Q5VV17 481 aaPredicted RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 LYSMD4Q5XG99 296 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 APTXQ7Z2E3 356 aaKnown RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 DGLUCYQ7Z3D6 616 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 FAM124AQ86V42 546 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 TMPRSS6Q8IU80 811 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 CCAR2Q8N163 923 aaKnown RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 EMC1Q8N766 993 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 NETO1Q8TDF5 533 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 CFAP57Q96MR6 1250 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 TBCBQ99426 244 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 NPY6RQ99463 290 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 MKRN2Q9H000 416 aaKnown RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 TKTL2Q9H0I9 626 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 WDCPQ9H6R7 721 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 CD93Q9NPY3 652 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 ADAM22Q9P0K1 906 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 MBD1Q9UIS9 605 aaPredicted RBP8.46□□□□□ -1.06
SNX1-207ENST00000559401 HS3ST4Q9Y661 456 aa8.46□□□□□ -1.06
SNX1-207ENST00000559401 VPS13AQ96RL7 3174 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 LRRC53A6NM62 1247 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 MEI4A8MW99 385 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 PATE3B3GLJ2 98 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 KHNYNO15037 678 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 GJB6O95452 261 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 ADCY5O95622 1261 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 DNTTP04053 509 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CYP1A1P04798 512 aaPredicted RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 CFIP05156 583 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CALB1P05937 261 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 MMP8P22894 467 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 SDC4P31431 198 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 RDXP35241 583 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 NNMTP40261 264 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CTSOP43234 321 aaPredicted RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 ATXN1P54253 815 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 ZNF33AQ06730 810 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 ZNF177Q13360 481 aaPredicted RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 ENPP2Q13822 863 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 PTPRNQ16849 979 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CLEC16AQ2KHT3 1053 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 PLEKHG6Q3KR16 790 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 IL31Q6EBC2 164 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 FBXL22Q6P050 247 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 LRSAM1Q6UWE0 723 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 LRRC31Q6UY01 552 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 KIAA0907Q7Z7F0 614 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms