RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PTPN7P35236 360 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 GGCXP38435 758 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 TNK2Q07912 1038 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 PDK2Q15119 407 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 SMTNL2Q2TAL5 461 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 TTC39BQ5VTQ0 682 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 DCAF12L1Q5VU92 463 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 PEX26Q7Z412 305 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 CHSY1Q86X52 802 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 RNF135Q8IUD6 432 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 GJD3Q8N144 294 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 C17orf53Q8N3J3 647 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 HJURPQ8NCD3 748 aaPredicted RBP15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 EXD1Q8NHP7 514 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 RAPGEF5Q92565 580 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 ZNF670Q9BS34 389 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 KLC2Q9H0B6 622 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 EBF3Q9H4W6 596 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 ZWILCHQ9H900 591 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 VANGL2Q9ULK5 521 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 TBC1D30Q9Y2I9 924 aa15.28■□□□□ 0.04
SNRPA1-207ENST00000559309 A0A0A0MRY4 1105 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 A0A1B0GVM2 712 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 TCAF2A6NFQ2 919 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 F5H5T6 163 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 DCLK1O15075 740 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 NARSO43776 548 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 FTCDO95954 541 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 CISD3P0C7P0 127 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 GJA4P35212 333 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 EIF2DP41214 584 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 VCPP55072 806 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 NAP1L1P55209 391 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 RPS24P62847 133 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 ALFQ53S48 1182 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 LGI2Q8N0V4 545 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 TMA16Q96EY4 203 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 CSPG4P5Q96PW8 444 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 ALS2CR12Q96Q35 445 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 SLC2A11Q9BYW1 496 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 ZYG11BQ9C0D3 744 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 SIK2Q9H0K1 926 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 DHX35Q9H5Z1 703 aaKnown RBP15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 GTSE1Q9NYZ3 720 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 CLEC4EQ9ULY5 219 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 JRKLQ9Y4A0 524 aa15.27■□□□□ 0.04
SNRPA1-207ENST00000559309 TRIOO75962 3097 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PRR33A8MZF0 331 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CLDN11O75508 207 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CNTN5O94779 1100 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 ADH1CP00326 375 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CHRM1P11229 460 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 GLULP15104 373 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 RHOQP17081 205 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 GOT1P17174 413 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 OPRD1P41143 372 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CDKN2BP42772 138 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CDH4P55283 916 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CDH6P55285 790 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 GAD2Q05329 585 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 ITPRIPL2Q3MIP1 535 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 RABGAP1LQ5R372 815 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 IER5LQ5T953 404 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 AFMIDQ63HM1 303 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CXorf57Q6NSI4 855 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 RFX8Q6ZV50 586 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 YAF2Q8IY57 180 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC35F6Q8N357 371 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 CPA6Q8N4T0 437 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PQLC3Q8N755 202 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PCDH19Q8TAB3 1148 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 FIBINQ8TAL6 211 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 HSPH1Q92598 858 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 TBC1D31Q96DN5 1066 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 TRIM44Q96DX7 344 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 ALG14Q96F25 216 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 EPAS1Q99814 870 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 NOL6Q9H6R4 1146 aaKnown RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 BRD9Q9H8M2 597 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PRDM16Q9HAZ2 1276 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 ARHGEF4Q9NR80 690 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 PACSIN2Q9UNF0 486 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 EFR3BQ9Y2G0 817 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC27A6Q9Y2P4 619 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 OR51B4Q9Y5P0 310 aa15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 MUC22E2RYF6 1773 aaPredicted RBP15.26■□□□□ 0.03
SNRPA1-207ENST00000559309 MIA3Q5JRA6 1907 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 FAM86C2PA6NEL3 165 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 TRDMT1O14717 391 aaKnown RBP15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 FGF10O15520 208 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 KIF5CO60282 957 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 TSPAN3O60637 253 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 ADH5P11766 374 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 TYRP14679 529 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms