RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 DDX56Q9NY93 547 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ANAPC5Q9UJX4 755 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 MRPS23Q9Y3D9 190 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 GRXCR2A6NFK2 248 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 CAPN9O14815 690 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 MSI1O43347 362 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 LIASO43766 372 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 IGLV3-25P01717 112 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 KRT1P04264 644 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 GPD1P21695 349 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 CDC25CP30307 473 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 MMP13P45452 471 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 SKIV2LQ15477 1246 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 C10orf120Q5SQS8 335 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 HECTD3Q5T447 861 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 POLNQ7Z5Q5 900 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 TAC4Q86UU9 113 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 CCDC25Q86WR0 208 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 SPATS2Q86XZ4 545 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ZNF276Q8N554 614 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 CENPIQ92674 756 aaPredicted RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 TRPC7Q9HCX4 862 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 PRDM6Q9NQX0 595 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 KLHL11Q9NVR0 708 aa16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 ATXN2Q99700 1313 aaKnown RBP16.38■□□□□ 0.21
CDC42BPB-204ENST00000559043 E7EVH7 732 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 PI4K2BG5E9Z4 385 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 RASGRF2O14827 1237 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 TTC4O95801 387 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 OLFM2O95897 454 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 KRT10P13645 584 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 EFEMP1Q12805 493 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 SLC25A52Q3SY17 297 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 ATAT1Q5SQI0 421 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 GPR158Q5T848 1215 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 MSANTD2Q6P1R3 559 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 EPS8L3Q8TE67 593 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 MRPS31Q92665 395 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 WBP2Q969T9 261 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 SMG9Q9H0W8 520 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 STMN4Q9H169 189 aaPredicted RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 POMKQ9H5K3 350 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 PPANQ9NQ55 473 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 hCG_1818297A0A087WSY0 165 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 DPYSL4O14531 572 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 TRUB2O95900 331 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 HDCP19113 662 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 FSHRP23945 695 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CDKN2BP42772 138 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 PTPN9P43378 593 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 HDAC4P56524 1084 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 AUHQ13825 339 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CDO1Q16878 200 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 TFDP3Q5H9I0 405 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CES5AQ6NT32 575 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 MIB1Q86YT6 1006 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 LEMD2Q8NC56 503 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 ST13P5Q8NFI4 369 aaPredicted RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CCHCR1Q8TD31 782 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 SUSD6Q92537 303 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 RAPGEF5Q92565 580 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 ZFRQ96KR1 1074 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 ANLNQ9NQW6 1124 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 PIGVQ9NUD9 493 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 CD207Q9UJ71 328 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 GGA2Q9UJY4 613 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 USP15Q9Y4E8 981 aaPredicted RBP16.37■□□□□ 0.21
CDC42BPB-204ENST00000559043 SYNJ2BP-COX16A0A087WUM0 186 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 I6L893 689 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 M0QYT0 321 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 ZNF197O14709 1029 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 ENDOD1O94919 500 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 PSMA2P25787 234 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 SDC4P31431 198 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 ATP5C1P36542 298 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 TUBP50607 506 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 IFI35P80217 286 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 SLC25A11Q02978 314 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 ERMARDQ5T6L9 678 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 UHMK1Q8TAS1 419 aaKnown RBP16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 RIN3Q8TB24 985 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 ADAMTS19Q8TE59 1207 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 RNF139Q8WU17 664 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 FGF13Q92913 245 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 MAGEB5Q9BZ81 275 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 FOXP3Q9BZS1 431 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 SMOC2Q9H3U7 446 aa16.36■□□□□ 0.21
CDC42BPB-204ENST00000559043 TMPRSS4Q9NRS4 437 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms