RNA–Protein interactions for RNA: ENST00000558343.1

AC023906.2-201, humanhuman

TSL 3 BASIC

Gene AC023906.2, Length 462 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC023906.2-201ENST00000558343 TBC1D3BA6NDS4 549 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3FA6NER0 549 aaPredicted RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 AQP12BA6NM10 295 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3LB9A6J9 549 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 RHODO00212 210 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 NKX2-8O15522 239 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 PRPF4O43172 522 aaKnown RBP eCLIP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 PPP6R2O75170 966 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 RPP40O75818 363 aaKnown RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3HP0C7X1 549 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 T-ENOLP0DO92 83 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TGM2P21980 687 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 GRK5P34947 590 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 PPM1AP35813 382 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 ALDH7A1P49419 539 aaKnown RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 NANOS2P60321 138 aaKnown RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SHC2P98077 582 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 PPATQ06203 517 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 ERV3-1Q14264 604 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 INPP5JQ15735 1006 aaPredicted RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SMTNL2Q2TAL5 461 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 BTBD16Q32M84 506 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 MAP9Q49MG5 647 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 DGKKQ5KSL6 1271 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3GQ6DHY5 549 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3CQ6IPX1 549 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 XRRA1Q6P2D8 792 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 ZNF474Q6S9Z5 364 aaPredicted RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SLC39A5Q6ZMH5 540 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 RFX8Q6ZV50 586 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 CYB5R4Q7L1T6 521 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TRABD2AQ86V40 505 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 DDIASQ8IXT1 998 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 CCDC146Q8IYE0 955 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 TBC1D3Q8IZP1 549 aaPredicted RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 STYXQ8WUJ0 223 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 EME1Q96AY2 570 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 ZNF347Q96SE7 839 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 PIMREGQ9BSJ6 248 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 KCNK9Q9NPC2 374 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SEMA4BQ9NPR2 832 aaPredicted RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 THSD1Q9NS62 852 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 ZBTB40Q9NUA8 1239 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SLC52A1Q9NWF4 448 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 AGO2Q9UKV8 859 aaKnown RBP3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 SLC12A4Q9UP95 1085 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 LRCH1Q9Y2L9 728 aa3.04□□□□□ -1.92
AC023906.2-201ENST00000558343 KIR2DS5A0A0G2JLQ3 304 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 ZNF814B7Z6K7 855 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 PRR23D1E9PI22 279 aaPredicted RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 KIR2DS3K7RE56 304 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 FFAR2O15552 330 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SMAD6O43541 496 aaKnown RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 TNFRSF6BO95407 300 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SGPL1O95470 568 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 ALDOCP09972 364 aaKnown RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 PRR23D2P0DMB1 279 aaPredicted RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 CDC25AP30304 524 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 RPL15P61313 204 aaKnown RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SF3A3Q12874 501 aaKnown RBP eCLIP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 GALNT3Q14435 633 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 PTGR1Q14914 329 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 C6orf10Q5SRN2 563 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SYCP2LQ5T4T6 812 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 ISM2Q6H9L7 571 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 HMBOX1Q6NT76 420 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 NOL8Q76FK4 1167 aaKnown RBP3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 TRAPPC11Q7Z392 1133 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 ADGRF3Q8IZF5 1079 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SMRP1Q8NCR6 262 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 HMGB4Q8WW32 186 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 TMEM41AQ96HV5 264 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 MECRQ9BV79 373 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 TMEM120AQ9BXJ8 343 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 SFXN1Q9H9B4 322 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 NFU1Q9UMS0 254 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 PCDHA12Q9UN75 941 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 LAMP3Q9UQV4 416 aa3.03□□□□□ -1.92
AC023906.2-201ENST00000558343 LOC105369274A0A096LPK9 316 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 LOC102723532A0A0G2JNH3 316 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 CXorf65A6NEN9 183 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 GOLGA6L3A6NEY3 463 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 C3orf70A6NLC5 250 aaPredicted RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 A6NNC1 897 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 MSI1O43347 362 aaKnown RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 TLX3O43711 291 aaPredicted RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 EPN2O95208 641 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 TOMM40O96008 361 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 CHRNB1P11230 501 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 GYS1P13807 737 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 TNFRSF1BP20333 461 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 FAM3BP58499 235 aaPredicted RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 TLE3Q04726 772 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 ARL13AQ5H913 290 aaPredicted RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 PIK3CD-AS1Q5SR53 167 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 ATPAF1Q5TC12 328 aaPredicted RBP3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 NUGGCQ68CJ6 796 aa3.02□□□□□ -1.93
AC023906.2-201ENST00000558343 PGBD2Q6P3X8 592 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms