RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CATSPERGQ6ZRH7 1159 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 FAM47EQ6ZV65 393 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 OTOAQ7RTW8 1153 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 ADGRG6Q86SQ4 1221 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 SETD3Q86TU7 594 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TMEM126BQ8IUX1 230 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CCDC60Q8IWA6 550 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 FAM13CQ8NE31 585 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 FBXO36Q8NEA4 188 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CATSPER1Q8NEC5 780 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 APPL2Q8NEU8 664 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 SPATA18Q8TC71 538 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 ACTL9Q8TC94 416 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TCP10LQ8TDR4 215 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 NAT14Q8WUY8 206 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 BSNDQ8WZ55 320 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CPT1BQ92523 772 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 FAF2Q96CS3 445 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CMTM5Q96DZ9 223 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TMEM176AQ96HP8 235 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CDRT15Q96T59 188 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 OLFM1Q99784 485 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 ACO2Q99798 780 aaKnown RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TMEM121Q9BTD3 319 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 PI4K2AQ9BTU6 479 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 BCO2Q9BYV7 579 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 ZCWPW1Q9H0M4 648 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 IKZF4Q9H2S9 585 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 SMARCAD1Q9H4L7 1026 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 Q9H521 79 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CCDC177Q9NQR7 707 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 EIF2B3Q9NR50 452 aaKnown RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TOPORSQ9NS56 1045 aaPredicted RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 THAP1Q9NVV9 213 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 KCTD5Q9NXV2 234 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 NSMCE4AQ9NXX6 385 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TXNDC16Q9P2K2 825 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 PGAP2Q9UHJ9 254 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 HAO1Q9UJM8 370 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CPSF3Q9UKF6 684 aaKnown RBP5.65□□□□□ -1.5
GABPB1-207ENST00000558335 USP18Q9UMW8 372 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CHKBQ9Y259 395 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TNFSF13BQ9Y275 285 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 CFL2Q9Y281 166 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TBC1D30Q9Y2I9 924 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 IFT52Q9Y366 437 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 TRIM17Q9Y577 477 aa5.65□□□□□ -1.5
GABPB1-207ENST00000558335 SMCHD1A6NHR9 2005 aa5.65□□□□□ -1.51
GABPB1-207ENST00000558335 COL11A1P12107 1806 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 A0A0G2JND7 137 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MAGEB16A2A368 324 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 WDR91A4D1P6 747 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRIM64A6NGJ6 449 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRIM64BA6NI03 449 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 A6NJR5 290 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SNTNA6NMZ2 147 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SOBPA7XYQ1 873 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ERI2A8K979 691 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SLCO1B7G3V0H7 640 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 H7C0C1 242 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 NCAM2O15394 837 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 GSC2O15499 205 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PSMD3O43242 534 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 FOXD2O60548 495 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MSCO60682 206 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 GLRA3O75311 464 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 LRCH4O75427 683 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 GCATO75600 419 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 RAD17O75943 681 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ENDOD1O94919 500 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 OLFM2O95897 454 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TRUB2O95900 331 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 GH1P01241 217 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SERPINA6P08185 405 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TPBGLP0DKB5 382 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CHRNB1P11230 501 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 POLR2CP19387 275 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 KCNA3P22001 575 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PRKCHP24723 683 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PSMA4P25789 261 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TARSP26639 723 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ADSLP30566 484 aaPredicted RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 SDC4P31431 198 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 RPL22P35268 128 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 PGM1P36871 562 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CCNFP41002 786 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TSPAN7P41732 249 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CASP2P42575 452 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 CBX5P45973 191 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ATP5OP48047 213 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 POLD2P49005 469 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 NEK3P51956 506 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 BCAR1P56945 870 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 ATP6V0D1P61421 351 aa5.64□□□□□ -1.51
GABPB1-207ENST00000558335 YWHAGP61981 247 aaKnown RBP eCLIP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 MRPS15P82914 257 aaKnown RBP5.64□□□□□ -1.51
GABPB1-207ENST00000558335 TFAMQ00059 246 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms