RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 UCHL3P15374 230 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 CYP11B1P15538 503 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 ABCB4P21439 1286 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 EEF1GP26641 437 aaKnown RBP12.33□□□□□ -0.44
HERC1-202ENST00000558324 CTSOP43234 321 aaPredicted RBP12.33□□□□□ -0.44
HERC1-202ENST00000558324 KLK7P49862 253 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 BPIFB4P59827 614 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 RNASE9P60153 205 aaKnown RBP12.33□□□□□ -0.44
HERC1-202ENST00000558324 ST8SIA6P61647 398 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 CENPCQ03188 943 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 PLEKHG6Q3KR16 790 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 PITRM1Q5JRX3 1037 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 WDR45BQ5MNZ6 344 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 DCAF12L1Q5VU92 463 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 RABEPKQ7Z6M1 372 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 METTL3Q86U44 580 aaKnown RBP12.33□□□□□ -0.44
HERC1-202ENST00000558324 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
HERC1-202ENST00000558324 DEFB124Q8NES8 71 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 SNX19Q92543 992 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 LMLNQ96KR4 655 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 CNTNAP3BQ96NU0 1288 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.33□□□□□ -0.44
HERC1-202ENST00000558324 ASNSD1Q9NWL6 643 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 F8VZ95 297 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 M0QYT0 321 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 DAB1O75553 588 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 MOCS3O95396 460 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 DNTTP04053 509 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 GNSP15586 552 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 OXTRP30559 389 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 CCR1P32246 355 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 SNX16P57768 344 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 RPS14P62263 151 aaKnown RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 SLC6A3Q01959 620 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 ZNF252P-AS1Q0IIN9 211 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 KRT31Q15323 416 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 C2CD6Q53TS8 623 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 SLC26A9Q7LBE3 791 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 NOP9Q86U38 636 aaKnown RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 DHX40Q8IX18 779 aaKnown RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 APCDD1Q8J025 514 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 MINDY1Q8N5J2 469 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 TMEM35BQ8NCS4 154 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 ENOX1Q8TC92 643 aaKnown RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 TTC17Q96AE7 1141 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 MYO19Q96H55 970 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 RPRD1AQ96P16 312 aaPredicted RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 NUP58Q9BVL2 599 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 KIAA1522Q9P206 1035 aaPredicted RBP12.32□□□□□ -0.44
HERC1-202ENST00000558324 SUSD2Q9UGT4 822 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 ERVW-1Q9UQF0 538 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 CKAP5Q14008 2032 aa12.32□□□□□ -0.44
HERC1-202ENST00000558324 GOLGA6L22H0YM25 854 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 GOLGA8SH3BPF8 625 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 SIN3BO75182 1162 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 GFPT2O94808 682 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 IGLV3-19P01714 112 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 ASLP04424 464 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 TPM2P07951 284 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 MMEP08473 750 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 SLC2A3P11169 496 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 TFE3P19532 575 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 ACSL1P33121 698 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 SULT1E1P49888 294 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 IRAK1P51617 712 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 EIF4EBP2Q13542 120 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 TTC31Q49AM3 519 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 RABGAP1LQ5R372 815 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 FAM102AQ5T9C2 384 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 OTUD1Q5VV17 481 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 CDKAL1Q5VV42 579 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 RNF219Q5W0B1 726 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 ZNF776Q68DI1 518 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 SASS6Q6UVJ0 657 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 CCAR2Q8N163 923 aaKnown RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 HDDC3Q8N4P3 179 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 GANCQ8TET4 914 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 RPL10LQ96L21 214 aaKnown RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 MRGPRX3Q96LB0 322 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 PRMT1Q99873 361 aaKnown RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 NAA15Q9BXJ9 866 aaKnown RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 C6orf106Q9H6K1 298 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 FAM207AQ9NSI2 230 aaPredicted RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 FANCLQ9NW38 375 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 SUN2Q9UH99 717 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 EIF2B4Q9UI10 523 aaKnown RBP12.31□□□□□ -0.44
HERC1-202ENST00000558324 VANGL2Q9ULK5 521 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
HERC1-202ENST00000558324 SPTBN2O15020 2390 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 LAMA1P25391 3075 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 A0A1B0GVM2 712 aa12.3□□□□□ -0.44
HERC1-202ENST00000558324 TCAF2A6NFQ2 919 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms