RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 NLRP9Q7RTR0 991 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 LINC00523Q86TU6 105 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 FAM228AQ86W67 206 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 THEM5Q8N1Q8 247 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 LZTR1Q8N653 840 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CCDC185Q8N715 623 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GPATCH11Q8N954 259 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SMC1BQ8NDV3 1235 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 DEPDC1BQ8WUY9 529 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SREK1Q8WXA9 508 aaKnown RBP8.55□□□□□ -1.04
SPG11-209ENST00000558253 ERP27Q96DN0 273 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 P2RY11Q96G91 374 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SERAC1Q96JX3 654 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SENP8Q96LD8 212 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 RMDN2Q96LZ7 410 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CPNE1Q99829 537 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SYT15Q9BQS2 421 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 MMADHCQ9H3L0 296 aaPredicted RBP8.55□□□□□ -1.04
SPG11-209ENST00000558253 LRRC40Q9H9A6 602 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 NOD2Q9HC29 1040 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 FAM105AQ9NUU6 356 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 DDX43Q9NXZ2 648 aaKnown RBP8.55□□□□□ -1.04
SPG11-209ENST00000558253 KLK14Q9P0G3 267 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 SIRPGQ9P1W8 387 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 TXNDC16Q9P2K2 825 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 MID2Q9UJV3 735 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 GJD2Q9UKL4 321 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CHKBQ9Y259 395 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 MCM3APO60318 1980 aa8.55□□□□□ -1.04
SPG11-209ENST00000558253 CITO14578 2027 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 DCLK1O15075 740 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 ADCY6O43306 1168 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 AVILO75366 819 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 H2AFYO75367 372 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 AP1G2O75843 785 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 LTFP02788 710 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 BPGMP07738 259 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SRGAP2BP0DMP2 458 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CALB2P22676 271 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SLC19A1P41440 591 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PSMC4P43686 418 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CXCR3P49682 368 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CCNG1P51959 295 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 HK2P52789 917 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PRKAA2P54646 552 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 TPI1P60174 286 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 ZBTB16Q05516 673 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SOX4Q06945 474 aaPredicted RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 GALNT2Q10471 571 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 AP1B1Q10567 949 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SREBF2Q12772 1141 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SEMA3BQ13214 749 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 MTA1Q13330 715 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 EFTUD2Q15029 972 aaKnown RBP eCLIP8.54□□□□□ -1.04
SPG11-209ENST00000558253 TAF1CQ15572 869 aaPredicted RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 RAB6CQ53S08 254 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 MDH1BQ5I0G3 518 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 BRMS1LQ5PSV4 323 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 WSCD1Q658N2 575 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PM20D1Q6GTS8 502 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 DCLRE1AQ6PJP8 1040 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 PAQR9Q6ZVX9 377 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 ZNF534Q76KX8 674 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CLNKQ7Z7G1 428 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SERINC5Q86VE9 423 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 OSTM1Q86WC4 334 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 FAM131BQ86XD5 332 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CRLF3Q8IUI8 442 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 NUDCD3Q8IVD9 361 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CCDC117Q8IWD4 279 aaPredicted RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CLEC4CQ8WTT0 213 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 E2F7Q96AV8 911 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 HDAC11Q96DB2 347 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 MRRFQ96E11 262 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 NSL1Q96IY1 281 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 FAM111AQ96PZ2 611 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 WWP1Q9H0M0 922 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 RAB6CQ9H0N0 254 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 MYLK2Q9H1R3 596 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 THAP1Q9NVV9 213 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 NOP53Q9NZM5 478 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 BFARQ9NZS9 450 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SLC17A7Q9P2U7 560 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 BAIAP2L1Q9UHR4 511 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 CPA4Q9UI42 421 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 SUFUQ9UMX1 484 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 ST3GAL5Q9UNP4 418 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 FCF1Q9Y324 198 aaKnown RBP8.54□□□□□ -1.04
SPG11-209ENST00000558253 CDY2AQ9Y6F7 541 aa8.54□□□□□ -1.04
SPG11-209ENST00000558253 TNPO2O14787 897 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 INPPL1O15357 1258 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 FGF10O15520 208 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 CABYRO75952 493 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms