RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 RAB20Q9NX57 234 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 VPS28Q9UK41 221 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PTBP2Q9UKA9 531 aaKnown RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 MYRFQ9Y2G1 1151 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 TRIM64CA6NLI5 447 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 H3BNH8 94 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 SIN3BO75182 1162 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 ZSCAN5DPP0CG00 497 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 SLC26A2P50443 739 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 SNRPFP62306 86 aaKnown RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 PPP3CAQ08209 521 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 FAAP100Q0VG06 881 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 STX3Q13277 289 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 DPYSQ14117 519 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PSMD6Q15008 389 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 ZBED5Q49AG3 693 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 LIN9Q5TKA1 542 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 LRRC38Q5VT99 294 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 ENOSF1Q7L5Y1 443 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 SLC26A11Q86WA9 606 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 HPS6Q86YV9 775 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 RHPN2Q8IUC4 686 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PIWIL2Q8TC59 973 aaKnown RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 ADAMTS16Q8TE57 1224 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 TRAPPC12Q8WVT3 735 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 VCPIP1Q96JH7 1222 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 RTKNQ9BST9 563 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 C16orf70Q9BSU1 422 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 STRA6Q9BX79 667 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 OSBPL11Q9BXB4 747 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 TDRD1Q9BXT4 1180 aaKnown RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 IKZF4Q9H2S9 585 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PNPLA3Q9NST1 481 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 ERAP1Q9NZ08 941 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 SLC16A4O15374 487 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SNRPAP09012 282 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 ELNP15502 786 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 RXRGP48443 463 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 STXBP5Q5T5C0 1151 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 GPR141Q7Z602 305 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 ARL10Q8N8L6 244 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SLC7A3Q8WY07 619 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 TMEM143Q96AN5 459 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 ISOC1Q96CN7 298 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 FAM118BQ9BPY3 351 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 TRIM56Q9BRZ2 755 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 KIFC3Q9BVG8 833 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 PAIP1Q9H074 479 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 RNPEPQ9H4A4 650 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 TMEM206Q9H813 350 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 PARVBQ9HBI1 364 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 XAB2Q9HCS7 855 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 DNAJC28Q9NX36 388 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SRRDQ9UH36 339 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 PCDHGB4Q9UN71 923 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SLC8A2Q9UPR5 921 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 AP4S1Q9Y587 144 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 PCDHGB5Q9Y5G0 923 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 HBP1O60381 514 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 SULT1C4O75897 302 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 FUCA1P04066 466 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 BPGMP07738 259 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 INHBBP09529 407 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 MAPTP10636 758 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 AKR1A1P14550 325 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 NPTX2P47972 431 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 EIF2B2P49770 351 aaKnown RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 ARPC4P59998 168 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 TRPC3Q13507 836 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 MOGQ16653 247 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 DGKDQ16760 1214 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 FSCBQ5H9T9 825 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 TCHHL1Q5QJ38 904 aaPredicted RBP11.16□□□□□ -0.62
USP3-206ENST00000558157 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 C6orf52Q5T4I8 152 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 IL23RQ5VWK5 629 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 FRA10AC1Q70Z53 315 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SHKBP1Q8TBC3 707 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 KAT5Q92993 513 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 THAP11Q96EK4 314 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 ANKRD36BP1Q96IX9 119 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 SIP14410 1827 aa11.16□□□□□ -0.62
USP3-206ENST00000558157 K7EPI3 171 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 MCF2LO15068 1137 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 KRT38O76015 456 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 NFKBIAP25963 317 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 GCLMP48507 274 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 GPC3P51654 580 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 SLC5A3P53794 718 aa11.15□□□□□ -0.62
USP3-206ENST00000558157 TAS2R40P59535 323 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms