RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 NR2E1Q9Y466 385 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 TRIOBPQ9H2D6 2365 aa17.38■□□□□ 0.37
SNX1-203ENST00000558040 PRRC2BQ5JSZ5 2229 aaKnown RBP17.37■□□□□ 0.37
SNX1-203ENST00000558040 DOCK6Q96HP0 2047 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 GOLGA6L7A0A1B0GV03 622 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 DRGXA6NNA5 263 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 WASH4PA8MWX3 477 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 GREM1O60565 184 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 PRAMEF12O95522 483 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 SLC6A4P31645 630 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 LTBRP36941 435 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 NOMO1Q15155 1222 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 ZNF77Q15935 545 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 C5orf22Q49AR2 442 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 DRICH1Q6PGQ1 229 aaPredicted RBP17.37■□□□□ 0.37
SNX1-203ENST00000558040 FAM217AQ8IXS0 508 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 ZDHHC14Q8IZN3 488 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 CPXM2Q8N436 756 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 RTL3Q8N8U3 475 aaKnown RBP17.37■□□□□ 0.37
SNX1-203ENST00000558040 CCDC26Q8TAB7 109 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 KRT12Q99456 494 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 TBC1D14Q9P2M4 693 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 FEZ2Q9UHY8 353 aaPredicted RBP17.37■□□□□ 0.37
SNX1-203ENST00000558040 CD207Q9UJ71 328 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 CCL26Q9Y258 94 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 R3HDM2Q9Y2K5 976 aaKnown RBP17.37■□□□□ 0.37
SNX1-203ENST00000558040 HEY1Q9Y5J3 304 aa17.37■□□□□ 0.37
SNX1-203ENST00000558040 NUP210Q8TEM1 1887 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 SLC9A3R1O14745 358 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 LIASO43766 372 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 ZNF189O75820 626 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 PECAM1P16284 738 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 COILP38432 576 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 EIF3EP60228 445 aaKnown RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 LMNB2Q03252 620 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 BYSLQ13895 437 aaKnown RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 RFWD3Q6PCD5 774 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 CCDC137Q6PK04 289 aaKnown RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 HJURPQ8NCD3 748 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 SMRP1Q8NCR6 262 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 GRK7Q8WTQ7 553 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 ATG4AQ8WYN0 398 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 SMARCD2Q92925 531 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 NKD2Q969F2 451 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 IGSF8Q969P0 613 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 ASB16Q96NS5 453 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 DDX47Q9H0S4 455 aaKnown RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 ETNK2Q9NVF9 386 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 TMEM248Q9NWD8 314 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 OBP2AQ9NY56 170 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 MPP6Q9NZW5 540 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 CDH22Q9UJ99 828 aa17.36■□□□□ 0.37
SNX1-203ENST00000558040 ZFP37Q9Y6Q3 630 aaPredicted RBP17.36■□□□□ 0.37
SNX1-203ENST00000558040 NCAM2O15394 837 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 MFSD11O43934 449 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 FOSL2P15408 326 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 MX2P20592 715 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 MAPKAPK2P49137 400 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 VCPP55072 806 aaKnown RBP17.35■□□□□ 0.37
SNX1-203ENST00000558040 CDH4P55283 916 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 GBE1Q04446 702 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 XRCC4Q13426 336 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 SNX1Q13596 522 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 DHX34Q14147 1143 aaKnown RBP17.35■□□□□ 0.37
SNX1-203ENST00000558040 GLE1Q53GS7 698 aaKnown RBP17.35■□□□□ 0.37
SNX1-203ENST00000558040 FAM78AQ5JUQ0 283 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 TEX35Q5T0J7 233 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 C8orf74Q6P047 294 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 NPNTQ6UXI9 565 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 CHST9Q7L1S5 443 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 MAATS1Q7Z4T9 603 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 NLRP14Q86W24 1093 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 BBS7Q8IWZ6 715 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 CCDC105Q8IYK2 499 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 LRRN4CLQ8ND94 238 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 SLC35B2Q8TB61 432 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 MYLIPQ8WY64 445 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 E2F7Q96AV8 911 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 OTUB2Q96DC9 234 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 CCDC114Q96M63 670 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 CDX2Q99626 313 aaPredicted RBP17.35■□□□□ 0.37
SNX1-203ENST00000558040 TRPV4Q9HBA0 871 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 DTLQ9NZJ0 730 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 SAE1Q9UBE0 346 aaPredicted RBP17.35■□□□□ 0.37
SNX1-203ENST00000558040 PCYOX1Q9UHG3 505 aa17.35■□□□□ 0.37
SNX1-203ENST00000558040 A0A1B0GVM2 712 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 TCAF2A6NFQ2 919 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 HACD1B0YJ81 288 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 H7C0C1 242 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 PPP1R12AO14974 1030 aaPredicted RBP17.34■□□□□ 0.37
SNX1-203ENST00000558040 CLDN11O75508 207 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 GAS8O95995 478 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 CYBBP04839 570 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 ATP5OP48047 213 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 PDK1Q15118 436 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 MPPE1Q53F39 396 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 ALFQ53S48 1182 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 ARTNQ5T4W7 220 aa17.34■□□□□ 0.37
SNX1-203ENST00000558040 CDKL3Q8IVW4 592 aaPredicted RBP17.34■□□□□ 0.37
SNX1-203ENST00000558040 TDRD5Q8NAT2 981 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms