RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TPI1P60174 286 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 ALFQ53S48 1182 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 ODF2Q5BJF6 829 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 MANEALQ5VSG8 457 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 LRRC38Q5VT99 294 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 PEX26Q7Z412 305 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 POLNQ7Z5Q5 900 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 MFN1Q8IWA4 741 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 KCTD6Q8NC69 237 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 EDAQ92838 391 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 EXOC4Q96A65 974 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 CHFRQ96EP1 664 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 MSANTD3Q96H12 275 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 DEC1Q9P2X7 70 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 CLEC4EQ9ULY5 219 aa21.92■■□□□ 1.1
CASC4-204ENST00000557945 IGLV3-10A0A075B6K4 115 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 A0A1B0GVM2 712 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 KRBA1A5PL33 1030 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 TCAF2A6NFQ2 919 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.91■■□□□ 1.1
CASC4-204ENST00000557945 H0Y626 953 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 DAPK3O43293 454 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 LUC7L3O95232 432 aaKnown RBP21.91■■□□□ 1.1
CASC4-204ENST00000557945 FTCDO95954 541 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 ALADP13716 330 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 EPHB2P29323 1055 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 OPRD1P41143 372 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 PRKCQQ04759 706 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 KDSRQ06136 332 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 SEMA3BQ13214 749 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 CDH18Q13634 790 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 DPYSL2Q16555 572 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 C5orf22Q49AR2 442 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 TXNDC11Q6PKC3 985 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 TFAP2DQ7Z6R9 452 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 ETFBKMTQ8IXQ9 262 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 CCAR2Q8N163 923 aaKnown RBP21.91■■□□□ 1.1
CASC4-204ENST00000557945 FAM3CQ92520 227 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 TRIM44Q96DX7 344 aaPredicted RBP21.91■■□□□ 1.1
CASC4-204ENST00000557945 SHDQ96IW2 340 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 ALS2CR12Q96Q35 445 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 P2RY13Q9BPV8 354 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 PPARGC1AQ9UBK2 798 aaKnown RBP21.91■■□□□ 1.1
CASC4-204ENST00000557945 AMFRQ9UKV5 643 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 TTC28Q96AY4 2481 aa21.91■■□□□ 1.1
CASC4-204ENST00000557945 COL4A2P08572 1712 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.9■■□□□ 1.1
CASC4-204ENST00000557945 H3BRJ5 948 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 MAN2B1O00754 1011 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 PSTPIP1O43586 416 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 CLDN11O75508 207 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 KRT1P04264 644 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 GOT1P17174 413 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 CD72P21854 359 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 ARL4AP40617 200 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 DGKGP49619 791 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 GALK1P51570 392 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 CDH4P55283 916 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 SIGLEC14Q08ET2 396 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 ZNF177Q13360 481 aaPredicted RBP21.9■■□□□ 1.1
CASC4-204ENST00000557945 PON2Q15165 354 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 GRAMD4Q6IC98 578 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 ZNF852Q6ZMS4 543 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 CD101Q93033 1021 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 PNKPQ96T60 521 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 CALN1Q9BXU9 219 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 SLC2A11Q9BYW1 496 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 PCDH18Q9HCL0 1135 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 ARHGEF4Q9NR80 690 aa21.9■■□□□ 1.1
CASC4-204ENST00000557945 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
CASC4-204ENST00000557945 LRRD1A4D1F6 860 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 USP27XA6NNY8 438 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 STK25O00506 426 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 TRIM24O15164 1050 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 HTR7P34969 479 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 ZNF135P52742 658 aaPredicted RBP21.89■■□□□ 1.1
CASC4-204ENST00000557945 ARTNQ5T4W7 220 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 C1orf228Q6PIY5 440 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 CHST9Q7L1S5 443 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 NT5DC3Q86UY8 548 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 MAP7D3Q8IWC1 876 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 WFDC5Q8TCV5 224 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 CATSPERBQ9H7T0 1116 aa21.89■■□□□ 1.1
CASC4-204ENST00000557945 DDX56Q9NY93 547 aaKnown RBP21.89■■□□□ 1.1
CASC4-204ENST00000557945 CWC15Q9P013 229 aaKnown RBP21.89■■□□□ 1.1
CASC4-204ENST00000557945 COL4A3Q01955 1670 aa21.89■■□□□ 1.09
CASC4-204ENST00000557945 F5P12259 2224 aa21.89■■□□□ 1.09
CASC4-204ENST00000557945 PI4K2BG5E9Z4 385 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 CD48P09326 243 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 RHOQP17081 205 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 EIF2DP41214 584 aaKnown RBP21.88■■□□□ 1.09
CASC4-204ENST00000557945 PDK2Q15119 407 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 PREPLQ4J6C6 727 aaPredicted RBP21.88■■□□□ 1.09
CASC4-204ENST00000557945 RFX8Q6ZV50 586 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 ZNF557Q8N988 423 aaPredicted RBP21.88■■□□□ 1.09
CASC4-204ENST00000557945 FIBINQ8TAL6 211 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 RAPGEF5Q92565 580 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 KRT35Q92764 455 aa21.88■■□□□ 1.09
CASC4-204ENST00000557945 FBRSL1Q9HCM7 1045 aaKnown RBP21.88■■□□□ 1.09
CASC4-204ENST00000557945 ABCB8Q9NUT2 735 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms