RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 RAB26Q9ULW5 256 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 AP4E1Q9UPM8 1137 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM114B3SHH9 223 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 DNAJA2O60884 412 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SPATA31D3P0C874 917 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 TNFAIP2Q03169 654 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 MBTD1Q05BQ5 628 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC9B1Q4ZJI4 515 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SH2D4BQ5SQS7 431 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 GRTP1Q5TC63 336 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 B3GNT6Q6ZMB0 384 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SPATA31D4Q6ZUB0 917 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM126BQ8IUX1 230 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 ZNF781Q8N8C0 355 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 ARNTL2Q8WYA1 636 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SLC4A5Q9BY07 1137 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 MAN1C1Q9NR34 630 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 IRAK4Q9NWZ3 460 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 PLK2Q9NYY3 685 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 DTLQ9NZJ0 730 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
VIPAS39-211ENST00000557658 SCN4AP35499 1836 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 ZBTB42B2RXF5 422 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 ADCY6O43306 1168 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TMCC1O94876 653 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 FBXO21O94952 628 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 POLBP06746 335 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 PTPN9P43378 593 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 NUDT2P50583 147 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TBC1D25Q3MII6 688 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 NBPF12Q5TAG4 269 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 ZFP1Q6P2D0 407 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 RBM44Q6ZP01 1051 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM110Q86TL2 294 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 C12orf29Q8N999 325 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 CSPG4P5Q96PW8 444 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 CPNE1Q99829 537 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 MRPS26Q9BYN8 205 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TCF7L2Q9NQB0 619 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 SNX15Q9NRS6 342 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 LZTS1Q9Y250 596 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 LOC285556D6RIA3 1793 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 PTPRFP10586 1907 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 AIM2O14862 343 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 STRNO43815 780 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TNFAIP8O95379 198 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TFAP2AP05549 437 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 GJB1P08034 283 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TGFB3P10600 412 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 MCF2P10911 925 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 SERPINB8P50452 374 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 RBP5P82980 135 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TMEM132DQ14C87 1099 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 NCBP2-AS2Q69YL0 99 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TRIM50Q86XT4 487 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 ZDHHC17Q8IUH5 632 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 TDRD5Q8NAT2 981 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 KYQ8NBH2 561 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 LENG1Q96BZ8 264 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 CERS2Q96G23 380 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 KCTD15Q96SI1 283 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 FERMT1Q9BQL6 677 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 PRMT7Q9NVM4 692 aaPredicted RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 PIH1D1Q9NWS0 290 aaKnown RBP12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 SYBUQ9NX95 663 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 MTMR10Q9NXD2 777 aa12.11□□□□□ -0.47
VIPAS39-211ENST00000557658 E2F8A0AVK6 867 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 RGSL1A5PLK6 1076 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 VILLO15195 856 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 H2AFYO75367 372 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 DGKIO75912 1065 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 CRTAMO95727 393 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 ERVK-10P10266 1014 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 GLDCP23378 1020 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 PIK3R1P27986 724 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 SERPINB5P36952 375 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 NUMBP49757 651 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 ADGRE1Q14246 886 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 FLOT2Q14254 428 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 SPANXN3Q5MJ09 141 aa12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 PPP1R26Q5T8A7 1209 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 BNC2Q6ZN30 1099 aaPredicted RBP12.1□□□□□ -0.47
VIPAS39-211ENST00000557658 CMC1Q7Z7K0 106 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms