RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ST8SIA6P61647 398 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 BYSLQ13895 437 aaKnown RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 C2CD6Q53TS8 623 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 PIK3R6Q5UE93 754 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 RNF219Q5W0B1 726 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 RAP1GAP2Q684P5 730 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 NAIF1Q69YI7 327 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SPECC1LQ69YQ0 1117 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 HEATR6Q6AI08 1181 aaKnown RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 RFWD3Q6PCD5 774 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 TSSK4Q6SA08 328 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 ARCQ7LC44 396 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 IRF2BP2Q7Z5L9 587 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 PHF13Q86YI8 300 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 FAM217AQ8IXS0 508 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 LGI2Q8N0V4 545 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 AHI1Q8N157 1196 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 PGBD3Q8N328 593 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 CARNMT1Q8N4J0 409 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 TXNDC5Q8NBS9 432 aaKnown RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 USP33Q8TEY7 942 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SLC39A13Q96H72 371 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 PIWIL1Q96J94 861 aaKnown RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 VCPIP1Q96JH7 1222 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 RPRD1AQ96P16 312 aaPredicted RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 HINFPQ9BQA5 517 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 TRIM5Q9C035 493 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SIK2Q9H0K1 926 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 DEF6Q9H4E7 631 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 MMP17Q9ULZ9 603 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 CAPN11Q9UMQ6 739 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SLC27A6Q9Y2P4 619 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 SCINQ9Y6U3 715 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 HELZP42694 1942 aaKnown RBP8.62□□□□□ -1.03
PSEN1-223ENST00000557511 ZDBF2Q9HCK1 2354 aa8.62□□□□□ -1.03
PSEN1-223ENST00000557511 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GFRA2O00451 464 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 AXIN1O15169 862 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 RTN2O75298 545 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 IGLV3-25P01717 112 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 SERPING1P05155 500 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 MYBL1P10243 752 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PABPC1P11940 636 aaKnown RBP8.61□□□□□ -1.03
PSEN1-223ENST00000557511 HOXB2P14652 356 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GPD1P21695 349 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 HOXA6P31267 233 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 NNMTP40261 264 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 NBL1P41271 181 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PRKCIP41743 596 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 FNTBP49356 437 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 ATP11AP98196 1134 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GAS6Q14393 721 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 CDO1Q16878 200 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GAB4Q2WGN9 574 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
PSEN1-223ENST00000557511 MS4A13Q5J8X5 152 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PHLDB2Q86SQ0 1253 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 C11orf74Q86VG3 221 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 MCOLN2Q8IZK6 566 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 ALLCQ8N6M5 410 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 C3orf20Q8ND61 904 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 RXFP2Q8WXD0 754 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PGAP3Q96FM1 320 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-223ENST00000557511 SPACA7Q96KW9 195 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 HHIPQ96QV1 700 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PCDHB18PQ96TA0 734 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 TBCBQ99426 244 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 NPY6RQ99463 290 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 NCAPGQ9BPX3 1015 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 TKTL2Q9H0I9 626 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
PSEN1-223ENST00000557511 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 ELOVL2Q9NXB9 296 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 KIAA1522Q9P206 1035 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GGA2Q9UJY4 613 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 FBXO10Q9UK96 956 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 GMEB2Q9UKD1 530 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 R4GN57 208 aa8.61□□□□□ -1.03
PSEN1-223ENST00000557511 MIA3Q5JRA6 1907 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 COL4A2P08572 1712 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 KMT2EQ8IZD2 1858 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 A0A1B0GVM2 712 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 TCRBV21S2A2A0A5A6 115 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 TCAF2A6NFQ2 919 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 SIGLEC16A6NMB1 481 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 TRIM24O15164 1050 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 SIAH2O43255 324 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CLDN11O75508 207 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 LUC7L3O95232 432 aaKnown RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 LMNAP02545 664 aaKnown RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 FTLP02792 175 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-223ENST00000557511 ASLP04424 464 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 CISD3P0C7P0 127 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 GZMAP12544 262 aa8.6□□□□□ -1.03
PSEN1-223ENST00000557511 SKILP12757 684 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms