RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 MYD88Q99836 296 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 VN1R3Q9BXE9 311 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 PRDM13Q9H4Q3 707 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 IL17RBQ9NRM6 502 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 CHPF2Q9P2E5 772 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 DNMT3BQ9UBC3 853 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 ZNF70Q9UC06 446 aaPredicted RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 AMFRQ9UKV5 643 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 MRPS17Q9Y2R5 130 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 DDX60Q8IY21 1712 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 KDM3BQ7LBC6 1761 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 ZNF804BA4D1E1 1349 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 POC1B-GALNT4F8VUJ3 575 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 HTATSF1O43719 755 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 RBMXL2O75526 392 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 PIAS2O75928 621 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 IL18RAPO95256 599 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 RASAL1O95294 804 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 ANXA2P07355 339 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 MYBP10242 640 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 HSPA5P11021 654 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 JUPP14923 745 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 PCSK6P29122 969 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 GKP32189 559 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 CARSP49589 748 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 MMP14P50281 582 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 CLCN2P51788 898 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 TIRAPP58753 221 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 TUBA4AP68366 448 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 TIAL1Q01085 375 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD8-212ENST00000557329 LRRC26Q2I0M4 334 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 ZNF750Q32MQ0 723 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 CCDC181Q5TID7 509 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 CACHD1Q5VU97 1274 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 LRCH2Q5VUJ6 765 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 RNF44Q7L0R7 432 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 BEND5Q7L4P6 421 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 ANKRD23Q86SG2 305 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 GALNT4Q8N4A0 578 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 OR56A3Q8NH54 315 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 R3HDM4Q96D70 268 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 VPS50Q96JG6 964 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 C17orf80Q9BSJ5 609 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 COLEC11Q9BWP8 271 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 STK31Q9BXU1 1019 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 BHMT2Q9H2M3 363 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 TTYH1Q9H313 450 aaPredicted RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 EPHX3Q9H6B9 360 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 TMOD2Q9NZR1 351 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 COL20A1Q9P218 1284 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 THEGQ9P2T0 379 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 ZNF212Q9UDV6 495 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 STEAP1Q9UHE8 339 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 DRG1Q9Y295 367 aaKnown RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 SNX13Q9Y5W8 968 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 SIPA1L3O60292 1781 aaPredicted RBP4.44□□□□□ -1.7
CHD8-212ENST00000557329 ANKRD36CQ5JPF3 1778 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 AOX1Q06278 1338 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 FAM205AQ6ZU69 1335 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 MAPK8IP3Q9UPT6 1336 aa4.44□□□□□ -1.7
CHD8-212ENST00000557329 LRRC3CA6NJW4 275 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 RHPN2P1A8MT19 583 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 A8MVJ9 347 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 SNAP23O00161 211 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 AREL1O15033 823 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 RRP9O43818 475 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 SRGAP2O75044 1071 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 CAND2O75155 1236 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 TAF5LO75529 589 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 USP1O94782 785 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 ENGP17813 658 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 BTF3P20290 206 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 UQCRC1P31930 480 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 PTDSS1P48651 473 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 GATMP50440 423 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 CHAF1AQ13111 956 aaPredicted RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 PPIL2Q13356 520 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 DAG1Q14118 895 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 SAFBQ15424 915 aaKnown RBP eCLIP4.43□□□□□ -1.7
CHD8-212ENST00000557329 NPY5RQ15761 445 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 C9orf50Q5SZB4 431 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 PTCHD4Q6ZW05 846 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 AMIGO2Q86SJ2 522 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 ADAMTS18Q8TE60 1221 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 BADQ92934 168 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 IQCDQ96DY2 449 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 SNX22Q96L94 193 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 THAP7Q9BT49 309 aaPredicted RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 SARGQ9BW04 601 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 ANKRD2Q9GZV1 360 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 CHST8Q9H2A9 424 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 CD209Q9NNX6 404 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 ZCCHC17Q9NP64 241 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 GAR1Q9NY12 217 aaKnown RBP4.43□□□□□ -1.7
CHD8-212ENST00000557329 SH3BP4Q9P0V3 963 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 DKK4Q9UBT3 224 aa4.43□□□□□ -1.7
CHD8-212ENST00000557329 DDX20Q9UHI6 824 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms