RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MS4A4AQ96JQ5 239 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 KATNAL1Q9BW62 490 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 MPP6Q9NZW5 540 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 MDM4O15151 490 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 PCSK1P29120 753 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 USP4Q13107 963 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 TSNAXIP1Q2TAA8 658 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 GPRIN1Q7Z2K8 1008 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ZDHHC17Q8IUH5 632 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ABI1Q8IZP0 508 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ARHGAP24Q8N264 748 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 BHMTQ93088 406 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 EBF4Q9BQW3 602 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 BCLAF3A2AJT9 711 aaKnown RBP15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ELF1P32519 619 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 PTPN7P35236 360 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 NR2C2P49116 596 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 HIC1Q14526 733 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 ATPAF2Q8N5M1 289 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 PLLPQ9Y342 182 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 SCN1AP35498 2009 aa15.73■□□□□ 0.11
TMEM55B-207ENST00000557041 XPO1O14980 1071 aaKnown RBP15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 MT-CYBP00156 380 aaPredicted RBP15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 PTPN4P29074 926 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 FDFT1P37268 417 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 RGS2P41220 211 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 CRYMQ14894 314 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 DPYSL2Q16555 572 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 MYLPFQ96A32 169 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 CYP4F12Q9HCS2 524 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 VAPBO95292 243 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 MX2P20592 715 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 CRYBB1P53674 252 aaPredicted RBP15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 CDK16Q00536 496 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 GRB14Q14449 540 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 MAMDC4Q6UXC1 1216 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 ISLR2Q6UXK2 745 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 RELL1Q8IUW5 271 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 SPNS2Q8IVW8 549 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 TEX9Q8N6V9 391 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 TEKT4Q8WW24 435 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 KHSRPQ92945 711 aaKnown RBP eCLIP15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 MYCBPQ99417 103 aaPredicted RBP15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 CHST12Q9NRB3 414 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 PNPOQ9NVS9 261 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 ATAD5Q96QE3 1844 aa15.72■□□□□ 0.11
TMEM55B-207ENST00000557041 F8W810 466 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 F2P00734 622 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 MAXP61244 160 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 OVOS1Q6IE37 1185 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 C10orf107Q8IVU9 208 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 RNF148Q8N7C7 305 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 SLC26A7Q8TE54 656 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 UPF1Q92900 1129 aaKnown RBP eCLIP15.71■□□□□ 0.119e-8■■■■□ 20.8
TMEM55B-207ENST00000557041 SLC38A7Q9NVC3 462 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 MIOSQ9NXC5 875 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 ITGA2BP08514 1039 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 ELNP15502 786 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 SERPINB9P50453 376 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 CTBP1Q13363 440 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 CUL3Q13618 768 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 TAF12Q16514 161 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 THEM5Q8N1Q8 247 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 OMDQ99983 421 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 VRTNQ9H8Y1 702 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 NKX1-2Q9UD57 310 aaPredicted RBP15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 CCL22O00626 93 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 C2CD2LO14523 706 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 OPHN1O60890 802 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 PDE5AO76074 875 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 ALADP13716 330 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 TCN1P20061 433 aaPredicted RBP15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 PLK1P53350 603 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 CACNA2D1P54289 1103 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 ASPHQ12797 758 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 PACS1Q6VY07 963 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 PDCD6IPQ8WUM4 868 aaKnown RBP15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 SPON2Q9BUD6 331 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 COLEC11Q9BWP8 271 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 DENND2DQ9H6A0 471 aaPredicted RBP15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 GTSE1Q9NYZ3 720 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 PCDHA11Q9Y5I1 949 aa15.71■□□□□ 0.11
TMEM55B-207ENST00000557041 COL1A2P08123 1366 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 A0A096LPK6 155 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 ARL5CA6NH57 179 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 PRR5-ARHGAP8B1AHC4 643 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 AIM2O14862 343 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 KRT36O76013 467 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 RALBP11234 206 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 SPRP35270 261 aaPredicted RBP15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 PTPN9P43378 593 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 SLC1A6P48664 564 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 ARHGAP8P85298 464 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 SLC25A3Q00325 362 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 DDR2Q16832 855 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 TIGD5Q53EQ6 642 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 SLC9A4Q6AI14 798 aa15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
TMEM55B-207ENST00000557041 NMRK2Q9NPI5 230 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms