RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TTYH3Q9C0H2 523 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 CD248Q9HCU0 757 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PIGVQ9NUD9 493 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 ABCB8Q9NUT2 735 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 CALCOCO1Q9P1Z2 691 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 THAP10Q9P2Z0 257 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-205ENST00000556310 GGA2Q9UJY4 613 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 TMEM59LQ9UK28 342 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 DMXL1Q9Y485 3027 aa11.94□□□□□ -0.5
SLIRP-205ENST00000556310 THADAQ6YHU6 1953 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 LRRC53A6NM62 1247 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TIMM44O43615 452 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 F9P00740 461 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 CALB1P05937 261 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 IL12RB1P42701 662 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 PTP4A2Q12974 167 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 CDH18Q13634 790 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 STARD3Q14849 445 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 NR1I3Q14994 352 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 LPAL2Q16609 132 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 FIGNQ5HY92 759 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TTC39BQ5VTQ0 682 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TMEM215Q68D42 235 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TRNP1Q6NT89 227 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 SND1Q7KZF4 910 aaKnown RBP eCLIP11.93□□□□□ -0.51e-12■■□□□ 11.5
SLIRP-205ENST00000556310 CHST9Q7L1S5 443 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 C11orf74Q86VG3 221 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 PHF13Q86YI8 300 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 CCDC117Q8IWD4 279 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 SLC30A5Q8TAD4 765 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 OLIG1Q8TAK6 271 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 FIBINQ8TAL6 211 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 AGPAT1Q99943 283 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 SYT11Q9BT88 431 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 METTL5Q9NRN9 209 aaKnown RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 SEPT11Q9NVA2 429 aaKnown RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 ARHGEF38Q9NXL2 777 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 STIM2Q9P246 746 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 STON1Q9Y6Q2 735 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 CEP250Q9BV73 2442 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
SLIRP-205ENST00000556310 NUP205Q92621 2012 aa11.93□□□□□ -0.5
SLIRP-205ENST00000556310 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 DOCK4Q8N1I0 1966 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 A0A1B0GVM2 712 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 TCAF2A6NFQ2 919 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 LRP3O75074 770 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 RETP07949 1114 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 GABRG2P18507 467 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 CD70P32970 193 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
SLIRP-205ENST00000556310 PBX1P40424 430 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 CXCR3P49682 368 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 DEUP1Q05D60 604 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 LMAN2Q12907 356 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ZNF234Q14588 700 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ELF2Q15723 593 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ASIC2Q16515 512 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 FUT11Q495W5 492 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 PLK5Q496M5 336 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 MBLAC2Q68D91 279 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 KIAA1211LQ6NV74 962 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 MON1BQ7L1V2 547 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 BNIPLQ7Z465 357 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 IRF2BP2Q7Z5L9 587 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ADIPOR2Q86V24 386 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 KBTBD6Q86V97 674 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 CFAP52Q8N1V2 620 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 CARNMT1Q8N4J0 409 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 DCLK2Q8N568 766 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 SORCS1Q8WY21 1168 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ZC3H10Q96K80 434 aaKnown RBP11.92□□□□□ -0.5
SLIRP-205ENST00000556310 LMLNQ96KR4 655 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 SPACA7Q96KW9 195 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 TBCBQ99426 244 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ADAM22Q9P0K1 906 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 HS3ST4Q9Y661 456 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 ABCA7Q8IZY2 2146 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 CEP192Q8TEP8 1941 aa11.92□□□□□ -0.5
SLIRP-205ENST00000556310 WASH3PC4AMC7 463 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 DCLK1O15075 740 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 ZBTB24O43167 697 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 PAGE1O75459 146 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 ADCY5O95622 1261 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 ATP5BP06576 529 aaKnown RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 DLDP09622 509 aaKnown RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 POLR2EP19388 210 aaKnown RBP11.91□□□□□ -0.5
SLIRP-205ENST00000556310 NDUFV2P19404 249 aa11.91□□□□□ -0.5
SLIRP-205ENST00000556310 PRKCHP24723 683 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms