RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ADAM32Q8TC27 787 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 MYEOVQ96EZ4 313 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 FAM81BQ96LP2 452 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 RSPH9Q9H1X1 276 aaPredicted RBP20.45■□□□□ 0.86
PRKCH-219ENST00000555906 POPDC2Q9HBU9 364 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 SGK2Q9HBY8 427 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 SCML1Q9UN30 329 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 PCDHB9Q9Y5E1 797 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 CABIN1Q9Y6J0 2220 aa20.45■□□□□ 0.86
PRKCH-219ENST00000555906 FAM221BA6H8Z2 402 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 E5RJQ4 531 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 CAPN9O14815 690 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 PAPSS1O43252 624 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 CBFA2T3O75081 653 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 GADD45BO75293 160 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 LETM1O95202 739 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 LUC7L3O95232 432 aaKnown RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 IGLV3-25P01717 112 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 ST8SIA6P61647 398 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 ARID5BQ14865 1188 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 TRIM65Q6PJ69 517 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 USP30Q70CQ3 517 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 GLRX5Q86SX6 157 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 CCDC117Q8IWD4 279 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 CARNMT1Q8N4J0 409 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 ZCCHC14Q8WYQ9 949 aaKnown RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 GAREM1Q9H706 876 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 IL21RQ9HBE5 538 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 UBE2TQ9NPD8 197 aaPredicted RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 CYTH4Q9UIA0 394 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 PCOLCE2Q9UKZ9 415 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 INTS6Q9UL03 887 aaKnown RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 FNDC3AQ9Y2H6 1198 aaKnown RBP20.44■□□□□ 0.86
PRKCH-219ENST00000555906 DMXL2Q8TDJ6 3036 aa20.44■□□□□ 0.86
PRKCH-219ENST00000555906 PTPRBP23467 1997 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 THAP12O43422 761 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 MOCS2O96007 188 aaPredicted RBP20.43■□□□□ 0.86
PRKCH-219ENST00000555906 FTH1P19P0C7X4 201 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 GRIA4P48058 902 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 PDCLQ13371 301 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 HNRNPA1L2Q32P51 320 aaKnown RBP20.43■□□□□ 0.86
PRKCH-219ENST00000555906 DCAF6Q58WW2 860 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 PITRM1Q5JRX3 1037 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 SYPL2Q5VXT5 272 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 TMEM110Q86TL2 294 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 ZNF606Q8WXB4 792 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 MRGPRX3Q96LB0 322 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 MED15Q96RN5 788 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 PABPC3Q9H361 631 aaKnown RBP20.43■□□□□ 0.86
PRKCH-219ENST00000555906 TM7SF3Q9NS93 570 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 PCDHGB2Q9Y5G2 931 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 SLCO1B1Q9Y6L6 691 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 ITIH6Q6UXX5 1313 aa20.43■□□□□ 0.86
PRKCH-219ENST00000555906 A0A1B0GVT2 93 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 SRPRAP08240 638 aaKnown RBP20.42■□□□□ 0.86
PRKCH-219ENST00000555906 TEAD4Q15561 434 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 HLA-BQ31612 363 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 CHSY1Q86X52 802 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 CHCHD4Q8N4Q1 142 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 BAHD1Q8TBE0 780 aaPredicted RBP20.42■□□□□ 0.86
PRKCH-219ENST00000555906 ADAMTS14Q8WXS8 1223 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 BIRC7Q96CA5 298 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 BTN2A3PQ96KV6 586 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 THAP9Q9H5L6 903 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 TM9SF3Q9HD45 589 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 TJP2Q9UDY2 1190 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 XPO7Q9UIA9 1087 aaKnown RBP20.42■□□□□ 0.86
PRKCH-219ENST00000555906 RWDD2AQ9UIY3 292 aa20.42■□□□□ 0.86
PRKCH-219ENST00000555906 ANKRD11Q6UB99 2663 aaPredicted RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 FLRT2O43155 660 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 SIN3BO75182 1162 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 MOCS3O95396 460 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 TRUB2O95900 331 aaKnown RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 TACR2P21452 398 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 CD27P26842 260 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 CSNK1EP49674 416 aaKnown RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 YWHAZP63104 245 aaKnown RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 FSCBQ5H9T9 825 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 RAP1GAP2Q684P5 730 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 SMYD5Q6GMV2 418 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 LGI2Q8N0V4 545 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 CFAP52Q8N1V2 620 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 MTG2Q9H4K7 406 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 KIAA1522Q9P206 1035 aaPredicted RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 APEX2Q9UBZ4 518 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 ERVW-1Q9UQF0 538 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 APOBEC2Q9Y235 224 aaKnown RBP20.41■□□□□ 0.86
PRKCH-219ENST00000555906 NCKAP1Q9Y2A7 1128 aa20.41■□□□□ 0.86
PRKCH-219ENST00000555906 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 BECN2A8MW95 431 aa20.4■□□□□ 0.86
PRKCH-219ENST00000555906 RNASEH1O60930 286 aaKnown RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 FSBPO95073 299 aa20.4■□□□□ 0.86
PRKCH-219ENST00000555906 SFSWAPQ12872 951 aaKnown RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 EIF4EBP2Q13542 120 aaPredicted RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 CST6Q15828 149 aa20.4■□□□□ 0.86
PRKCH-219ENST00000555906 KIF19Q2TAC6 998 aa20.4■□□□□ 0.86
PRKCH-219ENST00000555906 ZC3H12AQ5D1E8 599 aaKnown RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 TTC39BQ5VTQ0 682 aaPredicted RBP20.4■□□□□ 0.86
PRKCH-219ENST00000555906 GJB7Q6PEY0 223 aa20.4■□□□□ 0.86
PRKCH-219ENST00000555906 DBX2Q6ZNG2 339 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms