RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 COG1Q8WTW3 980 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 RNF157Q96PX1 679 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 HEMGNQ9BXL5 484 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 RAB6CQ9H0N0 254 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 SMG9Q9H0W8 520 aaKnown RBP11.54□□□□□ -0.56
SHMT2-220ENST00000555634 TRPV4Q9HBA0 871 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 ARHGEF4Q9NR80 690 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 DUS2Q9NX74 493 aaKnown RBP11.54□□□□□ -0.56
SHMT2-220ENST00000555634 CWC15Q9P013 229 aaKnown RBP11.54□□□□□ -0.56
SHMT2-220ENST00000555634 HPCAL4Q9UM19 191 aa11.54□□□□□ -0.56
SHMT2-220ENST00000555634 NYNRINQ9P2P1 1898 aaKnown RBP11.54□□□□□ -0.56
SHMT2-220ENST00000555634 HEPACAM2A8MVW5 462 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 H0Y626 953 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 MBTPS2O43462 519 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 GAS8O95995 478 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CD48P09326 243 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 LAMP2P13473 410 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 OR1E1P30953 314 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 ACTN2P35609 894 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 LTBRP36941 435 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 GGCXP38435 758 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CDH4P55283 916 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 TUBB4BP68371 445 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 SEMA3BQ13214 749 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 DPYSQ14117 519 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CA9Q16790 459 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 ATP13A4Q4VNC1 1196 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 Q6ZNB5 142 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CDKL3Q8IVW4 592 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-220ENST00000555634 BBS7Q8IWZ6 715 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 PYROXD2Q8N2H3 581 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 RASGEF1CQ8N431 466 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 ATPAF2Q8N5M1 289 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 RTL3Q8N8U3 475 aaKnown RBP11.53□□□□□ -0.56
SHMT2-220ENST00000555634 NSMCE1Q8WV22 266 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 OSCP1Q8WVF1 389 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 SUSD6Q92537 303 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 TSC1Q92574 1164 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 FAF2Q96CS3 445 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CCDC114Q96M63 670 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 TMPRSS4Q9NRS4 437 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 FEZ2Q9UHY8 353 aaPredicted RBP11.53□□□□□ -0.56
SHMT2-220ENST00000555634 STOML2Q9UJZ1 356 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CCL26Q9Y258 94 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 HEY1Q9Y5J3 304 aa11.53□□□□□ -0.56
SHMT2-220ENST00000555634 CHD5Q8TDI0 1954 aa11.52□□□□□ -0.56
SHMT2-220ENST00000555634 BRWD1Q9NSI6 2320 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 IGLV3-10A0A075B6K4 115 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ARHGAP42A6NI28 874 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ZNF185O15231 689 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MTSS1O43312 755 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 RAMP2O60895 175 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TBL1XO60907 577 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ECI2O75521 394 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 RHOCP08134 193 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 KRT10P13645 584 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 PSMC3P17980 439 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ERCC2P18074 760 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 HOXC13P31276 330 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 CHRNA3P32297 505 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ARSEP51690 589 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 PDK1Q15118 436 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TAZQ16635 292 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ANO4Q32M45 955 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 LEXMQ3ZCV2 418 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 PARP15Q460N3 678 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MPP7Q5T2T1 576 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MANEALQ5VSG8 457 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 SLC9A4Q6AI14 798 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TIGD7Q6NT04 549 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 FBXL22Q6P050 247 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 RFWD3Q6PCD5 774 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ZNF783Q6ZMS7 281 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 NUDT18Q6ZVK8 323 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 GSTA5Q7RTV2 222 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TFAP2DQ7Z6R9 452 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ADAT2Q7Z6V5 191 aaKnown RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 SETD3Q86TU7 594 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 LRRC49Q8IUZ0 686 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MFN1Q8IWA4 741 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 FAM217AQ8IXS0 508 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 CARNMT1Q8N4J0 409 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 CSGALNACT1Q8TDX6 532 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 NXPE3Q969Y0 559 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 ZSWIM3Q96MP5 696 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MYADMQ96S97 322 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 PHF7Q9BWX1 381 aaPredicted RBP11.52□□□□□ -0.57
SHMT2-220ENST00000555634 BBS2Q9BXC9 721 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 BRD8Q9H0E9 1235 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 MUC3BQ9H195 1237 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 TMEM248Q9NWD8 314 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 EPS15L1Q9UBC2 864 aa11.52□□□□□ -0.57
SHMT2-220ENST00000555634 XPO7Q9UIA9 1087 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms