RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CCR2P41597 374 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 RGS19P49795 217 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 EPHA5P54756 1037 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 VSNL1P62760 191 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 AUHQ13825 339 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 TEAD2Q15562 447 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 TRIP13Q15645 432 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 OASLQ15646 514 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ARSIQ5FYB1 569 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 STXBP5Q5T5C0 1151 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ACBD5Q5T8D3 534 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 CDKL3Q8IVW4 592 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 CCDC33Q8N5R6 958 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ALLCQ8N6M5 410 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 C12orf76Q8N812 135 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 NETO2Q8NC67 525 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SHKBP1Q8TBC3 707 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 CASKIN2Q8WXE0 1202 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SMG7Q92540 1137 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SLCO2A1Q92959 643 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ZNF707Q96C28 371 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 TCEAL4Q96EI5 215 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 RPRD1AQ96P16 312 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC22A12Q96S37 553 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ERP44Q9BS26 406 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 TMEM121Q9BTD3 319 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ZNF576Q9H609 170 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 NSUN3Q9H649 340 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 SFXN1Q9H9B4 322 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 GDF3Q9NR23 364 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 FAM114A2Q9NRY5 505 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 DZANK1Q9NVP4 752 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 ASIC3Q9UHC3 531 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 LSM7Q9UK45 103 aaKnown RBP9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 CLUHO75153 1309 aa9.95□□□□□ -0.82
HNRNPC-220ENST00000555585 HACD1B0YJ81 288 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 NRG2O14511 850 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PPP1R12AO14974 1030 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 KCNN4O15554 427 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 ERLIN1O75477 346 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 OLFM2O95897 454 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 IFNB1P01574 187 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 POU2F2P09086 479 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PFKLP17858 780 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 VPS41P49754 854 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC7A9P82251 487 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 XRCC4Q13426 336 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PTK6Q13882 451 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 HLTFQ14527 1009 aaKnown RBP eCLIP9.94□□□□□ -0.829e-12■□□□□ 10.7
HNRNPC-220ENST00000555585 BRD3Q15059 726 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PDK1Q15118 436 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 RARS2Q5T160 578 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 MANEALQ5VSG8 457 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 NADSYN1Q6IA69 706 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 FBXL22Q6P050 247 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 WDR93Q6P2C0 686 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 TMC5Q6UXY8 1006 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 CCNI2Q6ZMN8 369 aaPredicted RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 DDX42Q86XP3 938 aaKnown RBP eCLIP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 CCDC89Q8N998 374 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 CCNYQ8ND76 341 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 LRRN4Q8WUT4 740 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 WBP2Q969T9 261 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 AZIN2Q96A70 460 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 ZFRQ96KR1 1074 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PRMT1Q99873 361 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 DDX50Q9BQ39 737 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC46A2Q9BY10 475 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 ZYG11BQ9C0D3 744 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 TASP1Q9H6P5 420 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 MPP6Q9NZW5 540 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 PPARGC1AQ9UBK2 798 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 AGO1Q9UL18 857 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 RAB21Q9UL25 225 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 SNX24Q9Y343 169 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 MRPS23Q9Y3D9 190 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 SH3BP1Q9Y3L3 701 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 RAD54BQ9Y620 910 aa9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 HELZP42694 1942 aaKnown RBP9.94□□□□□ -0.82
HNRNPC-220ENST00000555585 BCLAF3A2AJT9 711 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 CFAP69A5D8W1 941 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 DRGXA6NNA5 263 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 TRDMT1O14717 391 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 SCAMP3O14828 347 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 TSPAN3O60637 253 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 MOSPD3O75425 235 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 CNTN5O94779 1100 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 KLKB1P03952 638 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 ETS1P14921 441 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 RHOQP17081 205 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 RBL1P28749 1068 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 HOXC13P31276 330 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 SLC6A4P31645 630 aa9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 STIP1P31948 543 aaKnown RBP9.93□□□□□ -0.82
HNRNPC-220ENST00000555585 AVPR1AP37288 418 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms