RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 LMAN2Q12907 356 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 CCDC6Q16204 474 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 PLK5Q496M5 336 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 CCDC14Q49A88 953 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 E4F1Q66K89 784 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 MBLAC2Q68D91 279 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 LAIR1Q6GTX8 287 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 TRIM72Q6ZMU5 477 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 ZNF366Q8N895 744 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 UCMAQ8WVF2 138 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 RXFP2Q8WXD0 754 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 MAGEB5Q9BZ81 275 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 TKTL2Q9H0I9 626 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 DUSP15Q9H1R2 295 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 PARD6AQ9NPB6 346 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 IFNKQ9P0W0 207 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 HS3ST4Q9Y661 456 aa12.84□□□□□ -0.35
TRAPPC6B-205ENST00000555269 OTOGLQ3ZCN5 2332 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 F5H5T6 163 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 H0Y626 953 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CAVIN2O95810 425 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RETP07949 1114 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 POLR2EP19388 210 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 NDUFV2P19404 249 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RFC1P35251 1148 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PBX1P40424 430 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CTSOP43234 321 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 NSFP46459 744 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CENPCQ03188 943 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SPEM2Q0P670 501 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ENPP2Q13822 863 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PTPRNQ16849 979 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 C15orf59Q2T9L4 293 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FUT11Q495W5 492 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SFMBT2Q5VUG0 894 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PHF13Q86YI8 300 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 APCDD1Q8J025 514 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 DEFB119Q8N690 84 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PGAP3Q96FM1 320 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ZC3H10Q96K80 434 aaKnown RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TTYH3Q9C0H2 523 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARRDC1-AS1Q9H2J1 176 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MTG2Q9H4K7 406 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 HAUS4Q9H6D7 363 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CD93Q9NPY3 652 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARHGEF38Q9NXL2 777 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RRN3Q9NYV6 651 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 AIPL1Q9NZN9 384 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MBD1Q9UIS9 605 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 GMEB2Q9UKD1 530 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 VANGL2Q9ULK5 521 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 STAP1Q9ULZ2 295 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MYO6Q9UM54 1294 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 PLA2G4CQ9UP65 541 aa12.83□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CNTN5O94779 1100 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 F9P00740 461 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 EPHX1P07099 455 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CCDC172P0C7W6 258 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 KRT3P12035 628 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MZF1P28698 734 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 P2RY2P41231 377 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CSKP41240 450 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CDH18Q13634 790 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ASIC2Q16515 512 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CDO1Q16878 200 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MAP7D1Q3KQU3 841 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARTNQ5T4W7 220 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 LCE2DQ5TA82 110 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 WDR59Q6PJI9 974 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SERPINA13PQ6UXR4 307 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SND1Q7KZF4 910 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MON1BQ7L1V2 547 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ARCQ7LC44 396 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 BNIPLQ7Z465 357 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 FAM131BQ86XD5 332 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MCOLN2Q8IZK6 566 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 AHI1Q8N157 1196 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 CCAR2Q8N163 923 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RNF214Q8ND24 703 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 WFIKKN2Q8TEU8 576 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TTC17Q96AE7 1141 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MRGPRX1Q96LB2 322 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 RPRD1AQ96P16 312 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 MKRN2Q9H000 416 aaKnown RBP12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 TSPY26PQ9H489 355 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 SMOC1Q9H4F8 434 aa12.82□□□□□ -0.36
TRAPPC6B-205ENST00000555269 ABCA7Q8IZY2 2146 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms