RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 TRIM62Q9BVG3 475 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 METTL14Q9HCE5 456 aaKnown RBP16.07■□□□□ 0.16
NEDD1-207ENST00000555114 CEP83Q9Y592 693 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 PCDHGA1Q9Y5H4 931 aa16.07■□□□□ 0.16
NEDD1-207ENST00000555114 MUC22E2RYF6 1773 aaPredicted RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 A0A1B0GTQ1 180 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 GOLGA6L7A0A1B0GV03 622 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 TARSL2A2RTX5 802 aaKnown RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 KCNK3O14649 394 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 SIN3BO75182 1162 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 RNASEH2AO75792 299 aaKnown RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 SMC2O95347 1197 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 SRPRAP08240 638 aaKnown RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 ABCB4P21439 1286 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 HNF1BP35680 557 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 CSKP41240 450 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 PRCPP42785 496 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 IL9RQ01113 521 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 NNTQ13423 1086 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 CST6Q15828 149 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 CNGA2Q16280 664 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 COBLL1Q53SF7 1204 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 TMPRSS12Q86WS5 348 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 SCUBE3Q8IX30 993 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 ZC3H3Q8IXZ2 948 aaKnown RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 CARNMT1Q8N4J0 409 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 WFDC5Q8TCV5 224 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 LRIG1Q96JA1 1093 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 GSDMAQ96QA5 445 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 ELF4Q99607 663 aaPredicted RBP16.06■□□□□ 0.16
NEDD1-207ENST00000555114 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 AASDHPPTQ9NRN7 309 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 FZD4Q9ULV1 537 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 CABIN1Q9Y6J0 2220 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 NUMA1Q14980 2115 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 PTPRBP23467 1997 aa16.06■□□□□ 0.16
NEDD1-207ENST00000555114 DSPP15924 2871 aaKnown RBP16.05■□□□□ 0.16
NEDD1-207ENST00000555114 EDDM13A0A1B0GTR0 161 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 A0A1W2PP55 124 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 PIK3R2O00459 728 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 ITGAVP06756 1048 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 SLC6A4P31645 630 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 NNMTP40261 264 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 ARRB1P49407 418 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-207ENST00000555114 GALCP54803 685 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 NUCB2P80303 420 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 PNOCQ13519 176 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 STIM1Q13586 685 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 ARID5BQ14865 1188 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 SOWAHCQ53LP3 525 aaPredicted RBP16.05■□□□□ 0.16
NEDD1-207ENST00000555114 PMF1Q6P1K2 205 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 NCEH1Q6PIU2 408 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 DHRS13Q6UX07 377 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 PPM1KQ8N3J5 372 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 UBR7Q8N806 425 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 SLC35C1Q96A29 364 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 NXPE2Q96DL1 559 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 SLC6A18Q96N87 628 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 GDF3Q9NR23 364 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
NEDD1-207ENST00000555114 TLR6Q9Y2C9 796 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 FASNP49327 2511 aaKnown RBP16.05■□□□□ 0.16
NEDD1-207ENST00000555114 APC2O95996 2303 aa16.05■□□□□ 0.16
NEDD1-207ENST00000555114 FREM2Q5SZK8 3169 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 KNL1Q8NG31 2342 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 FAM149AA5PLN7 773 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ENC1O14682 589 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 CAPN9O14815 690 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MID1O15344 667 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 LUC7L3O95232 432 aaKnown RBP16.04■□□□□ 0.16
NEDD1-207ENST00000555114 LDOC1O95751 146 aaPredicted RBP16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ADH1BP00325 375 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 APOEP02649 317 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 C1SP09871 688 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 CD38P28907 300 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 SLC8A1P32418 973 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 FMO5P49326 533 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MS4A13Q5J8X5 152 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 PITRM1Q5JRX3 1037 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 C6orf118Q5T5N4 469 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ANKRD40Q6AI12 368 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MMAAQ8IVH4 418 aaKnown RBP16.04■□□□□ 0.16
NEDD1-207ENST00000555114 OXR1Q8N573 874 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 TFAP2BQ92481 460 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 FAM149B1Q96BN6 582 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MYO19Q96H55 970 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 PRICKLE1Q96MT3 831 aaPredicted RBP16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ORAI3Q9BRQ5 295 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MIS12Q9H081 205 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 MTG2Q9H4K7 406 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 TJP2Q9UDY2 1190 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ADAMTS1Q9UHI8 967 aa16.04■□□□□ 0.16
NEDD1-207ENST00000555114 ERVW-1Q9UQF0 538 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms