RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 FASTKD5Q7L8L6 764 aaKnown RBP5.91□□□□□ -1.46
VRK1-203ENST00000555067 GALNT5Q7Z7M9 940 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 PIM3Q86V86 326 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.91□□□□□ -1.463e-6■□□□□ 9.4
VRK1-203ENST00000555067 TXLNBQ8N3L3 684 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 METTL25Q8N6Q8 603 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 MUL1Q969V5 352 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 ZDHHC12Q96GR4 267 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 MARK4Q96L34 752 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 HIST1H2AAQ96QV6 131 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 STK33Q9BYT3 514 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 CHST8Q9H2A9 424 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 PRKRIP1Q9H875 184 aaPredicted RBP5.91□□□□□ -1.46
VRK1-203ENST00000555067 USP29Q9HBJ7 922 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 SLC39A10Q9ULF5 831 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 HS3ST3B1Q9Y662 390 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 CD8B2A6NJW9 211 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 IPO5O00410 1097 aaKnown RBP5.9□□□□□ -1.46
VRK1-203ENST00000555067 FYB1O15117 783 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 TULP3O75386 442 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 TOMM40O96008 361 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 RBL1P28749 1068 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 SERPINF1P36955 418 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 YPEL5P62699 121 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 FOXO1Q12778 655 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 ATP11CQ8NB49 1132 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 SMRP1Q8NCR6 262 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 CHCHD6Q9BRQ6 235 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 WWOXQ9NZC7 414 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 VPS51Q9UID3 782 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 TTLL3Q9Y4R7 772 aa5.9□□□□□ -1.46
VRK1-203ENST00000555067 ANKRD18BA2A2Z9 1011 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 H3BNX3 289 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 ANP32CO43423 234 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 DDX58O95786 925 aaKnown RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 TBX18O95935 607 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 PSG1P11464 419 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 FGFR2P21802 821 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 LIFRP42702 1097 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 CARSP49589 748 aaKnown RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 TIGD6Q17RP2 521 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 FAM110CQ1W6H9 321 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 C9orf47Q6ZRZ4 202 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 MEPCEQ7L2J0 689 aaKnown RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 CREBRFQ8IUR6 639 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 C11orf44Q8N8P7 122 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 FAM71DQ8N9W8 422 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 CENPIQ92674 756 aaPredicted RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 RSRC1Q96IZ7 334 aaKnown RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 MSLNLQ96KJ4 702 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 TTC14Q96N46 770 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 NAP1L5Q96NT1 182 aaPredicted RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 CINPQ9BW66 212 aaPredicted RBP5.89□□□□□ -1.47
VRK1-203ENST00000555067 ANKEF1Q9NU02 776 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 MYO1AQ9UBC5 1043 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 SLC13A4Q9UKG4 626 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 CAPN11Q9UMQ6 739 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 SLC27A6Q9Y2P4 619 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 SQORQ9Y6N5 450 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 SPATA31A1Q5TZJ5 1347 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 TTC3P53804 2025 aa5.89□□□□□ -1.47
VRK1-203ENST00000555067 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.88□□□□□ -1.47
VRK1-203ENST00000555067 FAM90A8PA6NJQ4 464 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 CYSRT1A8MQ03 144 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 SYT5O00445 386 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 INPPL1O15357 1258 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 USP12O75317 370 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 TIPRLO75663 272 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 CD63P08962 238 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 FAM90A13PP0C7W8 464 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 FAM90A24PP0C7X0 464 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 BTF3P20290 206 aaKnown RBP5.88□□□□□ -1.47
VRK1-203ENST00000555067 ADD2P35612 726 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 JAK3P52333 1124 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 COPAP53621 1224 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 ZBED6P86452 979 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 CCDC15Q0P6D6 951 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 STIM1Q13586 685 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 SPARCL1Q14515 664 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 FBXO47Q5MNV8 452 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 PLAG1Q6DJT9 500 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 CLEC9AQ6UXN8 241 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 RINLQ6ZS11 566 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 BRINP3Q76B58 766 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 LRRTM4Q86VH4 590 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.88□□□□□ -1.47
VRK1-203ENST00000555067 ZNF548Q8NEK5 533 aaPredicted RBP5.88□□□□□ -1.47
VRK1-203ENST00000555067 MAELQ96JY0 434 aaKnown RBP5.88□□□□□ -1.47
VRK1-203ENST00000555067 NUAK2Q9H093 628 aa5.88□□□□□ -1.47
VRK1-203ENST00000555067 AQP12BA6NM10 295 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 HOXC11O43248 304 aaPredicted RBP5.87□□□□□ -1.47
VRK1-203ENST00000555067 RPN1P04843 607 aaKnown RBP5.87□□□□□ -1.47
VRK1-203ENST00000555067 TMEM225BP0DP42 221 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 XBP1P17861 261 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 RPS6KB1P23443 525 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 NTSR1P30989 418 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 HOXD12P35452 270 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 THBS3P49746 956 aa5.87□□□□□ -1.47
VRK1-203ENST00000555067 NR1H2P55055 460 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms