RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SLC4A5Q9BY07 1137 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 TPX2Q9ULW0 747 aaKnown RBP17.95■□□□□ 0.46
SHOX-204ENST00000554971 CAPN7Q9Y6W3 813 aa17.95■□□□□ 0.46
SHOX-204ENST00000554971 NUP210Q8TEM1 1887 aaPredicted RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 RTN3O95197 1032 aaPredicted RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 CEBPBP17676 345 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 YWHAQP27348 245 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 TKTL1P51854 596 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 VCPP55072 806 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 TAF12Q16514 161 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 LONRF1Q17RB8 773 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 PTPN20Q4JDL3 420 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 MFSD7Q6UXD7 560 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 SUGP1Q8IWZ8 645 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 UHMK1Q8TAS1 419 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 CLEC4CQ8WTT0 213 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 STK32AQ8WU08 396 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 ING5Q8WYH8 240 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 MIS12Q9H081 205 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 TMEM51Q9NW97 253 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 ZNF148Q9UQR1 794 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 E5RJQ4 531 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 GSTA1P08263 222 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 USP17L7P0C7H9 530 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 CDKN2BP42772 138 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 MAGEA4P43358 317 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 SLC18A1P54219 525 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 CYP4F8P98187 520 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 ZNF252P-AS1Q0IIN9 211 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 LLGL1Q15334 1064 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 TRIP13Q15645 432 aaPredicted RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 OASLQ15646 514 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 CYP4A22Q5TCH4 519 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 TMEM110Q86TL2 294 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 CCT6BQ92526 530 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 PIWIL1Q96J94 861 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 HSFY1Q96LI6 401 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 NECTIN4Q96NY8 510 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 RBM15Q96T37 977 aaKnown RBP eCLIP17.94■□□□□ 0.46
SHOX-204ENST00000554971 PCDH9Q9HC56 1237 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 OSER1Q9NX31 292 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 SHOC2Q9UQ13 582 aa17.94■□□□□ 0.46
SHOX-204ENST00000554971 MRPS23Q9Y3D9 190 aaKnown RBP17.94■□□□□ 0.46
SHOX-204ENST00000554971 HELZP42694 1942 aaKnown RBP17.93■□□□□ 0.46
SHOX-204ENST00000554971 ZDHHC11BP0C7U3 371 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 KRT3P12035 628 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 SP100P23497 879 aaPredicted RBP17.93■□□□□ 0.46
SHOX-204ENST00000554971 TAZQ16635 292 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 P3H1Q32P28 736 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 ZFYVE27Q5T4F4 411 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 PM20D1Q6GTS8 502 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 PPP1R21Q6ZMI0 780 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 ARHGEF18Q6ZSZ5 1173 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 GET4Q7L5D6 327 aaPredicted RBP17.93■□□□□ 0.46
SHOX-204ENST00000554971 NPAS3Q8IXF0 933 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 LEMD2Q8NC56 503 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 FGF13Q92913 245 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 FBXO32Q969P5 355 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 MYADMQ96S97 322 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 PRMT1Q99873 361 aaKnown RBP17.93■□□□□ 0.46
SHOX-204ENST00000554971 ULBP1Q9BZM6 244 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 NMUR1Q9HB89 426 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 SENP1Q9P0U3 644 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 GMIPQ9P107 970 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 SCML2Q9UQR0 700 aa17.93■□□□□ 0.46
SHOX-204ENST00000554971 ZNF840PA6NDX5 716 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 CCT8L1PA6NM43 557 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 PAPSS1O43252 624 aaPredicted RBP17.92■□□□□ 0.46
SHOX-204ENST00000554971 LCP1P13796 627 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 FSHRP23945 695 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 TEAD2Q15562 447 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ANKRD20A8PQ5CZ79 823 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 UBAP2Q5T6F2 1119 aaKnown RBP17.92■□□□□ 0.46
SHOX-204ENST00000554971 SCD5Q86SK9 330 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 SCUBE3Q8IX30 993 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 SLC35B2Q8TB61 432 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ZSWIM3Q96MP5 696 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ATXN3LQ9H3M9 355 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 FBXO44Q9H4M3 255 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 UXTQ9UBK9 157 aaPredicted RBP17.92■□□□□ 0.46
SHOX-204ENST00000554971 FETUBQ9UGM5 382 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 DNPEPQ9ULA0 475 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 TMEM120BA0PK00 339 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ALOX15BO15296 676 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ZBED1O96006 694 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 ERBB2P04626 1255 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 GABRB2P47870 512 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 CCDC13Q8IYE1 715 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 LRRC34Q8IZ02 419 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 DYDC1Q8WWB3 177 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 SGSM3Q96HU1 749 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 LRRC4Q9HBW1 653 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 COMMD8Q9NX08 183 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 EURLQ9NYK6 297 aa17.92■□□□□ 0.46
SHOX-204ENST00000554971 C2orf78A6NCI8 922 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 YJEFN3A6XGL0 299 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 E7ENQ6 273 aa17.91■□□□□ 0.46
SHOX-204ENST00000554971 VIMP08670 466 aaKnown RBP17.91■□□□□ 0.46
SHOX-204ENST00000554971 PSMA2P25787 234 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms