RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 WDCPQ9H6R7 721 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ABHD10Q9NUJ1 306 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 MYO1AQ9UBC5 1043 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 GGA2Q9UJY4 613 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 SLC8A2Q9UPR5 921 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 STARD13Q9Y3M8 1113 aa12.77□□□□□ -0.37
SYNE2-214ENST00000554928 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
SYNE2-214ENST00000554928 A0A1W2PQF6 199 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 FAM72CH0Y354 149 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 LUC7L3O95232 432 aaKnown RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 F9P00740 461 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 SLC2A3P11169 496 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 PABPC1P11940 636 aaKnown RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 NBL1P41271 181 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 IL12RB1P42701 662 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF143P52747 638 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CRY1Q16526 586 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ASTE1Q2TB18 679 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ALFQ53S48 1182 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 BRMS1LQ5PSV4 323 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 MPP7Q5T2T1 576 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 FAM72AQ5TYM5 149 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 DAB2IPQ5VWQ8 1189 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 FAM72DQ6L9T8 149 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CXorf57Q6NSI4 855 aaKnown RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CHST9Q7L1S5 443 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 FAM72BQ86X60 149 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 APCDD1Q8J025 514 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ZBTB44Q8NCP5 570 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 OR8K1Q8NGG5 319 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 VCPIP1Q96JH7 1222 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 DDX50Q9BQ39 737 aaKnown RBP12.76□□□□□ -0.37
SYNE2-214ENST00000554928 PACSIN1Q9BY11 444 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 SLC2A11Q9BYW1 496 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 THAP2Q9H0W7 228 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 SLC6A17Q9H1V8 727 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 MTG2Q9H4K7 406 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 CD248Q9HCU0 757 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 ELOVL2Q9NXB9 296 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
SYNE2-214ENST00000554928 TMEM191CA6NGB0 347 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 HRO43593 1189 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 LILRB5O75023 590 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ATG13O75143 517 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 PYGBP11216 843 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 HLA-EP13747 358 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 PRKCHP24723 683 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 MZF1P28698 734 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ADRA1BP35368 520 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 PLA2G5P39877 138 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 TRIM14Q14142 442 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF234Q14588 700 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 PTPRNQ16849 979 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 C5orf22Q49AR2 442 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 MBLAC2Q68D91 279 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 DCUN1D2Q6PH85 259 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 SND1Q7KZF4 910 aaKnown RBP eCLIP12.75□□□□□ -0.37
SYNE2-214ENST00000554928 STRADAQ7RTN6 431 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 CPNE8Q86YQ8 564 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 PYROXD2Q8N2H3 581 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ZNF366Q8N895 744 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 MDGA1Q8NFP4 955 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 FIBINQ8TAL6 211 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ACDQ96AP0 544 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 BTBD6Q96KE9 485 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 TPSD1Q9BZJ3 242 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 GPATCH2LQ9NWQ4 482 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 ZSCAN32Q9NX65 697 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 MPP6Q9NZW5 540 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
SYNE2-214ENST00000554928 NEU3Q9UQ49 428 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 INVSQ9Y283 1065 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 BZW2Q9Y6E2 419 aaKnown RBP12.75□□□□□ -0.37
SYNE2-214ENST00000554928 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
SYNE2-214ENST00000554928 DRGXA6NNA5 263 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 E9PAM4 449 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 DCLK1O15075 740 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 SRGAP2O75044 1071 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 HOXB2P14652 356 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 TCF4P15884 667 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 NTSR1P30989 418 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 CSKP41240 450 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 GALCP54803 685 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 CDH18Q13634 790 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 PITRM1Q5JRX3 1037 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 CCDC122Q5T0U0 273 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 MANEALQ5VSG8 457 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 ANO7Q6IWH7 933 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 ALKBH5Q6P6C2 394 aaKnown RBP12.74□□□□□ -0.37
SYNE2-214ENST00000554928 ASCL5Q7RTU5 278 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
SYNE2-214ENST00000554928 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms