RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MYO10Q9HD67 2058 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 EEF2KO00418 725 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 TRDMT1O14717 391 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 CREB3O43889 395 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 TSPAN3O60637 253 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 SRGAP2O75044 1071 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 ZRANB2O95218 330 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 TYRP14679 529 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 RHOQP17081 205 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 KDELR1P24390 212 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 HOXD9P28356 352 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 GJC1P36383 396 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 GGCXP38435 758 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 PEX5P50542 639 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 OXCT1P55809 520 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 RWDD2BP57060 319 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 TPI1P60174 286 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 RPS24P62847 133 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 ANO4Q32M45 955 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 PREPLQ4J6C6 727 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 ATP13A4Q4VNC1 1196 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 ZFYVE27Q5T4F4 411 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 CCDC117Q8IWD4 279 aaPredicted RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 RCOR2Q8IZ40 523 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 EXD1Q8NHP7 514 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 TSC1Q92574 1164 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 IGSF8Q969P0 613 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 RBM41Q96IZ5 413 aaKnown RBP16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 NEU3Q9UQ49 428 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 SNX10Q9Y5X0 201 aa16.95■□□□□ 0.3
SPTLC2-203ENST00000554901 LRRD1A4D1F6 860 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 OTOL1A6NHN0 477 aaPredicted RBP16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 WASH4PA8MWX3 477 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 NEDD8-MDP1E9PL57 170 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 TBL1XO60907 577 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 EPHB2P29323 1055 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 GJA4P35212 333 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 COPS2P61201 443 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 ZNF569Q5MCW4 686 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 RWDD4Q6NW29 188 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 RFX8Q6ZV50 586 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 RALGPS2Q86X27 583 aaPredicted RBP16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 ETFBKMTQ8IXQ9 262 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 KRT35Q92764 455 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 MYEOVQ96EZ4 313 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 MAGEB5Q9BZ81 275 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 TMEM248Q9NWD8 314 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 WNT16Q9UBV4 365 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 FBXO10Q9UK96 956 aa16.94■□□□□ 0.3
SPTLC2-203ENST00000554901 TCF20Q9UGU0 1960 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 NARSO43776 548 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 LUC7L3O95232 432 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 KRT1P04264 644 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 TNNT1P13805 278 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 CETN2P41208 172 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 MAPKAPK2P49137 400 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 SGSHP51688 502 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 DPYSL3Q14195 570 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 RPS6KA1Q15418 735 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 GAB4Q2WGN9 574 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 SETD3Q86TU7 594 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 SUGP1Q8IWZ8 645 aaKnown RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 FIBINQ8TAL6 211 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 RAPGEF5Q92565 580 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 FAF2Q96CS3 445 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 CSPG4P5Q96PW8 444 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 UHRF1Q96T88 793 aaPredicted RBP16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 CALN1Q9BXU9 219 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 TBC1D30Q9Y2I9 924 aa16.93■□□□□ 0.3
SPTLC2-203ENST00000554901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 C3orf70A6NLC5 250 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 DAPK3O43293 454 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 GOT1P17174 413 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 IL4RP24394 825 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 ZNF177Q13360 481 aaPredicted RBP16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 CDH18Q13634 790 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 DPYSQ14117 519 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 TAZQ16635 292 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 NLRP14Q86W24 1093 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 CFAP52Q8N1V2 620 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 RTL3Q8N8U3 475 aaKnown RBP16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 CD320Q9NPF0 282 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 ZNF212Q9UDV6 495 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 EFR3BQ9Y2G0 817 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 SLC27A6Q9Y2P4 619 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 PIAS3Q9Y6X2 628 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 NCOR1O75376 2440 aa16.92■□□□□ 0.3
SPTLC2-203ENST00000554901 SPECC1L-ADORA2AF8WAN1 911 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 H0Y626 953 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CTHP32929 405 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 PTPN7P35236 360 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 MARCKSL1P49006 195 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 GNG11P61952 73 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 PRKCQQ04759 706 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms