RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 TNFRSF18Q9Y5U5 241 aa4.51□□□□□ -1.69
SCFD1-214ENST00000554819 LMTK3Q96Q04 1460 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 ZNF521Q96K83 1311 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 PCP4P48539 62 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 LAMB3Q13751 1172 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 C10orf62Q5T681 223 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-214ENST00000554819 ADGRF3Q8IZF5 1079 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 ARL14EPQ8N8R7 260 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-214ENST00000554819 SCAMP5Q8TAC9 235 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 OTUD7AQ8TE49 926 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-214ENST00000554819 HMCESQ96FZ2 354 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 ZFYVE19Q96K21 471 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 TRMOQ9BU70 441 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 SPRTNQ9H040 489 aaPredicted RBP4.5□□□□□ -1.69
SCFD1-214ENST00000554819 TMLHEQ9NVH6 421 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 BAG5Q9UL15 447 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 DAPP1Q9UN19 280 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 SLC8A2Q9UPR5 921 aa4.5□□□□□ -1.69
SCFD1-214ENST00000554819 DPPA5A6NC42 116 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 SOCS2O14508 198 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 UGDHO60701 494 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 PEX14O75381 377 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 ALDOCP09972 364 aaKnown RBP4.49□□□□□ -1.69
SCFD1-214ENST00000554819 FAM3BP58499 235 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-214ENST00000554819 SHC2P98077 582 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 B4GALNT1Q00973 533 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 TWIST1Q15672 202 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 GPR162Q16538 588 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 TTC22Q5TAA0 569 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 SULT6B1Q6IMI4 303 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 ERAP2Q6P179 960 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 CCDC174Q6PII3 467 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 ZNF793Q6ZN11 406 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.49□□□□□ -1.692e-11■■■□□ 15
SCFD1-214ENST00000554819 PAQR4Q8N4S7 273 aaPredicted RBP4.49□□□□□ -1.69
SCFD1-214ENST00000554819 OR52N4Q8NGI2 321 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 STT3BQ8TCJ2 826 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 SCARB1Q8WTV0 552 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 C3orf49Q96BT1 292 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 FCRL4Q96PJ5 515 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 TRAPPC9Q96Q05 1148 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 ZNF347Q96SE7 839 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 MAGEH1Q9H213 219 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 AFG3L2Q9Y4W6 797 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 PCDHA10Q9Y5I2 948 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 HS3ST3B1Q9Y662 390 aa4.49□□□□□ -1.69
SCFD1-214ENST00000554819 COPG1Q9Y678 874 aaKnown RBP4.49□□□□□ -1.69
SCFD1-214ENST00000554819 PRF1P14222 555 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 SERPINA4P29622 427 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 CHKAP35790 457 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 NR4A2P43354 598 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 ME1P48163 572 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 RCAN1P53805 252 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 SRSF1Q07955 248 aaKnown RBP eCLIP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 C10orf76Q5T2E6 689 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 ISM2Q6H9L7 571 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 LRIG3Q6UXM1 1119 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 ARFGAP1Q8N6T3 406 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 SLC44A5Q8NCS7 719 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 WIPF2Q8TF74 440 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 RUBCNQ92622 972 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 NPAS1Q99742 590 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 DDX23Q9BUQ8 820 aaKnown RBP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 SORBS1Q9BX66 1292 aaKnown RBP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 OSBPL5Q9H0X9 879 aaPredicted RBP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 AGO2Q9UKV8 859 aaKnown RBP4.48□□□□□ -1.69
SCFD1-214ENST00000554819 TNFSF13BQ9Y275 285 aa4.48□□□□□ -1.69
SCFD1-214ENST00000554819 HMX3A6NHT5 357 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 HNRNPRO43390 633 aaKnown RBP4.47□□□□□ -1.69
SCFD1-214ENST00000554819 NFATC1O95644 943 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 CYP19A1P11511 503 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-214ENST00000554819 PEPDP12955 493 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 PNLIPRP1P54315 467 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 ADPRHP54922 357 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 MTX1Q13505 466 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 DLGAP5Q15398 846 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 GALNTL6Q49A17 601 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 FAM83BQ5T0W9 1011 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 DGAT2L7PQ6IED9 249 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 LIN54Q6MZP7 749 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 CYB5R4Q7L1T6 521 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 GALNT15Q8N3T1 639 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 ENDOVQ8N8Q3 282 aaKnown RBP4.47□□□□□ -1.69
SCFD1-214ENST00000554819 OR6Y1Q8NGX8 325 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 TRAPPC12Q8WVT3 735 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 CLMNQ96JQ2 1002 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 PIGSQ96S52 555 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 PIMREGQ9BSJ6 248 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 TAF1DQ9H5J8 278 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-214ENST00000554819 PDE11AQ9HCR9 933 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 POT1Q9NUX5 634 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 HEY2Q9UBP5 337 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 GRHPRQ9UBQ7 328 aa4.47□□□□□ -1.69
SCFD1-214ENST00000554819 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.47□□□□□ -1.69
SCFD1-214ENST00000554819 TRBV5-3A0A0A0MS03 114 aa4.46□□□□□ -1.7
SCFD1-214ENST00000554819 KIR2DS5A0A0G2JLQ3 304 aa4.46□□□□□ -1.7
SCFD1-214ENST00000554819 AGAP5A6NIR3 686 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms